R: Integration and Analysis of Chromatin Loop Data

# Integration and Analysis of Chromatin Loop Data

## Documentation for package ‘LoopRig’ version 0.1.1

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

ConsensusLoops | Subset an object of class LoopRanges using consensus options
DropLoops | Drop loops from _LoopRanges_ objects using anchor and loop sizes
ElementsToRanges | Create a list of ranges objects from element data
ExportBED | Export a LoopRanges or _italics_ElementRanges object to a BED/BEDPE file
LinkedElements | Determines elements linked by loop anchors
LoopsToRanges | Create a list of ranges objects from looping data
ScaffoldElements | Finds elements within loops scaffolded by another set of elements
StackedElements | Finds elements stacked atop loop anchors