R: Calculate and Rectify Moran's I

# Calculate and Rectify Moran's I

## Documentation for package ‘Irescale’ version 2.3.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package README

## Help Pages

buildStabilityTable | Finds how many iterations are necessary to achieve stability in resampling method.
buildStabilityTableForCorrelation | Finds how many iterations are necessary to achieve stability in resampling method for rectifying I through pearson corrrelation.
calculateDistMatrixFromBoard | Calculates the distance in a chessboard-alike structure.
calculateEuclideanDistance | Given a 2D data structure, it calculates the euclidean distance among all the points.
calculateLocalI | Computing the Local Moran's I
calculateManhattanDistance | Calculates the manhattan distance.
calculateMoranI | Calculates the Moran's I using the algorithm proposed by Chen (Chen 2013).
calculatePvalue | p-value calculation.
calculateWeightedDistMatrix | Calculates a weighted representation of the distance matrix.
convexHull | Plots the convexhull polygon from the data (latitude, longitude), and calculates the center of the convexhull and its area.
coor | Transforms a x,y position in a cartesian plane into a position in a 1D array.
expectedValueI | Calculates the expected value for local I
iCorrection | Scaling process for Moran's I.
ItoPearsonCorrelation | Calculate the equivalence r from the I percentile in the I-Null Distribution.
loadChessBoard | Loads a chessboard or matrix alike input file.
loadDistanceMatrix | Loads a distance matrix. Instead of computing the distance from latitute and longitude 'LoadDistanceMatrix' Loads the distance matrix, avoiding computing it from latitude and longitude.
loadFile | Loads a file with latitude, longitude and variable of interest
loadSatelliteImage | Loads a Satellite image in PNG format
localICorrection | Scaling process for Local Moran's I.
nullDristribution | Calculate a distribution of how the var of interest is correlated to a
plotHistogramOverlayCorrelation | Creates an overlay of the histogram of the data and the theorical normal distribution.
plotHistogramOverlayNormal | Creates an overlay of the histogram of the data and the theorical normal distribution.
procrustes | Procrustes distance between two surfaces
rectifyIrho | Rectify I using a correlation method for all the variables in an input file.
resamplingI | Calculates n permutations of the variable of interest to calculate n different I in order to create the Null distribution.
resamplingLocalI | Calculates n permutations of the variable of interest to calculate n different I in order to create the Null distribution.
rescaleI | Performs the rescale for all the variables in an input file.
saveFile | Saves a report with important statistics to describe the sample.
standardize | Standardize the input vector
standardizedByColumn | Scales a matrix by column.
summaryLocalIVector | Calculates statistic for the received Matrix.
summaryVector | Calculates statistic for the received vector.
transformImageToList | Transforms the image in the object need it to run the analysis.
transformImageToMatrix | Transforms the image to a matrix.