# mintyr <a href='https://tony2015116.github.io/mintyr/'><img src='man/figures/logo.svg' alt="mintyr package logo" width="120" align="right" />
<!--apple-touch-icon-120x120.png-->
<!-- <picture><source srcset="reference/figures/apple-touch-icon-120x120.png" media="(prefers-color-scheme: dark)"></picture> -->

<!-- badges: start -->
[![CRAN status](https://www.r-pkg.org/badges/version/mintyr)](https://CRAN.R-project.org/package=mintyr)
[![CRAN total downloads](https://cranlogs.r-pkg.org/badges/grand-total/mintyr)](https://CRAN.R-project.org/package=mintyr)
[![Dev Version](https://img.shields.io/badge/devel%20version-0.1.2.9000-purple.svg)](https://github.com/tony2015116/mintyr)
[![Lifecycle: experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)
[![R-CMD-check](https://github.com/tony2015116/mintyr/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/tony2015116/mintyr/actions/workflows/R-CMD-check.yaml)
[![GitHub last commit](https://img.shields.io/github/last-commit/tony2015116/mintyr)](#)
<!-- badges: end -->

<!--[![CodeFactor](https://www.codefactor.io/repository/github/tony2015116/mintyr/badge/main)](https://www.codefactor.io/repository/github/tony2015116/mintyr/overview/main)
[![GitHub R package version](https://img.shields.io/github/r-package/v/tony2015116/mintyr)](#)-->

`mintyr` is a toolkit for genomic selection in animal breeding with emphasis on multi-breed and multi-trait nested grouping operations. Streamlines iterative analysis workflows when working with `ASReml-R` package. Includes utility functions for phenotypic data processing commonly used by animal breeders.

## Installation
You can install this package from either CRAN or GitHub:
``` r
### From CRAN
install.packages("mintyr")
### From GitHub
pak::pak("tony2015116/mintyr")
```
## Cheat sheet
<a href='https://raw.githubusercontent.com/tony2015116/mintyr/main/man/figures/cheatsheet.svg' target="_blank"><img src='https://raw.githubusercontent.com/tony2015116/mintyr/main/man/figures/cheatsheet.svg' alt="mintyr package quick reference guide and cheatsheet" width="800" align="center" /></a>


## Acknowledgments

Special thanks to AI assistance, particularly ChatGPT and Claude, for helping transform the initial concepts and inspirations for the `mintyr` package into reality. Their contribution has been invaluable in refining ideas, improving code structure, and crafting documentation.
