CRAN Package Check Results for Package EcoCleanR

Last updated on 2026-04-19 09:50:19 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.3 37.46 312.85 350.31 OK
r-devel-linux-x86_64-debian-gcc 1.0.3 21.91 211.84 233.75 OK
r-devel-linux-x86_64-fedora-clang 1.0.3 59.00 496.45 555.45 OK
r-devel-linux-x86_64-fedora-gcc 1.0.3 64.00 548.60 612.60 OK
r-devel-macos-arm64 1.0.3 8.00 65.00 73.00 OK
r-devel-windows-x86_64 1.0.3 37.00 268.00 305.00 OK
r-patched-linux-x86_64 1.0.3 31.33 300.00 331.33 OK
r-release-linux-x86_64 1.0.3 29.70 292.22 321.92 ERROR
r-release-macos-arm64 1.0.3 8.00 63.00 71.00 OK
r-release-macos-x86_64 1.0.3 25.00 466.00 491.00 OK
r-release-windows-x86_64 1.0.3 33.00 264.00 297.00 OK
r-oldrel-macos-arm64 1.0.3 7.00 74.00 81.00 OK
r-oldrel-macos-x86_64 1.0.3 25.00 399.00 424.00 OK
r-oldrel-windows-x86_64 1.0.3 50.00 365.00 415.00 OK

Check Details

Version: 1.0.3
Check: tests
Result: ERROR Running ‘testthat.R’ [23s/82s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(EcoCleanR) > > test_check("EcoCleanR") Querying WoRMS for 'Mexacanthina lugubris'... [NOT FOUND]'Mexacanthina lugubris' not found in WoRMS. Saving _problems/test-data_cleaning-101.R Saving _problems/test-data_cleaning-103.R Saving _problems/test-data_cleaning-105.R Saving _problems/test-data_cleaning-107.R Suggested threshold at 96th percentile: 8801832 Imputation iteration 1 Imputation iteration 2 No more missing values to impute. [ FAIL 4 | WARN 0 | SKIP 7 | PASS 25 ] ══ Skipped tests (7) ═══════════════════════════════════════════════════════════ • Skipping ec_extract_env_layers test - big shape files required to load for it (1): 'test-data_cleaning.R:206:3' • Skipping ec_flag_non_east_atlantic test - big shape files required to load for it (1): 'test-data_cleaning.R:462:3' • Skipping ec_flag_non_region test - big shape files required to load for it (3): 'test-data_cleaning.R:191:3', 'test-data_cleaning.R:324:3', 'test-data_cleaning.R:366:3' • Skipping ec_flag_non_west_atlantic test - big shape files required to load for it (1): 'test-data_cleaning.R:484:3' • Skipping ec_flag_non_west_pacific test - big shape files required to load for it (1): 'test-data_cleaning.R:506:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-data_cleaning.R:101:3'): ec_worms_synonym works ────────────── Expected `result` to be an S3 object. Actual OO type: none. ── Failure ('test-data_cleaning.R:103:3'): ec_worms_synonym works ────────────── Expected `all(c("Accepted_syn_worms", "ecodata_syn_with_count") %in% colnames(result))` to be TRUE. Differences: `actual`: FALSE `expected`: TRUE ── Failure ('test-data_cleaning.R:105:3'): ec_worms_synonym works ────────────── Expected `"Mexacanthina lugubris" %in% result$Accepted_syn_worms` to be TRUE. Differences: `actual`: FALSE `expected`: TRUE ── Failure ('test-data_cleaning.R:107:3'): ec_worms_synonym works ────────────── Expected `any(grepl("Mexacanthina lugubris \\([0-9]+\\)", result$ecodata_syn_with_count))` to be TRUE. Differences: `actual`: FALSE `expected`: TRUE [ FAIL 4 | WARN 0 | SKIP 7 | PASS 25 ] Error: ! Test failures. Execution halted Flavor: r-release-linux-x86_64