CRAN Package Check Results for Package alien

Last updated on 2026-04-19 09:50:14 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.2 2.79 393.23 396.02 NOTE
r-devel-linux-x86_64-debian-gcc 1.0.2 1.91 274.69 276.60 NOTE
r-devel-linux-x86_64-fedora-clang 1.0.2 529.34 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.2 662.74 NOTE
r-devel-macos-arm64 1.0.2 1.00 92.00 93.00 NOTE
r-devel-windows-x86_64 1.0.2 6.00 315.00 321.00 ERROR
r-patched-linux-x86_64 1.0.2 2.46 394.76 397.22 NOTE
r-release-linux-x86_64 1.0.2 2.37 394.26 396.63 NOTE
r-release-macos-arm64 1.0.2 NOTE
r-release-macos-x86_64 1.0.2 2.00 482.00 484.00 NOTE
r-release-windows-x86_64 1.0.2 7.00 455.00 462.00 NOTE
r-oldrel-macos-arm64 1.0.2 OK
r-oldrel-macos-x86_64 1.0.2 2.00 468.00 470.00 OK
r-oldrel-windows-x86_64 1.0.2 7.00 476.00 483.00 OK

Check Details

Version: 1.0.2
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘lambda_functions.R’ ‘likelihood-space.R’ ‘snc.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 1.0.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'basic_usage.Rmd' using rmarkdown --- finished re-building 'basic_usage.Rmd' --- re-building 'native_discoveries.Rmd' using rmarkdown specified C++17 make cmd is make -f "D:/RCompile/recent/R/etc/x64/Makeconf" -f "D:/RCompile/recent/R/share/make/winshlib.mk" CXX='$(CXX17) $(CXX17STD)' CXXFLAGS='$(CXX17FLAGS)' CXXPICFLAGS='$(CXX17PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX17LDFLAGS)' SHLIB_LD='$(SHLIB_CXX17LD)' SHLIB="file32d473316627.dll" WIN=64 TCLBIN= OBJECTS="file32d473316627.o" make would use make[1]: Entering directory '/d/temp/2026_04_17_01_50_00_1722/RtmpqSFukr' g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.6/Rcpp/include/" -I"D:/temp/2026_04_17_01_50_00_1722/RtmpY5pm7P/RLIBS_c3ac7dd96038/RcppEigen/include/" -I"D:/temp/2026_04_17_01_50_00_1722/RtmpY5pm7P/RLIBS_c3ac7dd96038/RcppEigen/include/unsupported" -I"D:/temp/2026_04_17_01_50_00_1722/RtmpY5pm7P/RLIBS_c3ac7dd96038/BH/include" -I"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/src/" -I"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/" -I"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/include/" -DRCPP_PARALLEL_USE_TBB=1 -I"D:/RCompile/CRANpkg/lib/4.6/rstan/include" -DEIGEN_NO_DEBUG -DBOOST_DISABLE_ASSERTS -DBOOST_PENDING_INTEGER_LOG2_HPP -DSTAN_THREADS -DUSE_STANC3 -DSTRICT_R_HEADERS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -D_HAS_AUTO_PTR_ETC=0 -include "D:/RCompile/CRANpkg/lib/4.6/StanHeaders/include/stan/math/prim/fun/Eigen.hpp" -std=c++1y -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c file32d473316627.cpp -o file32d473316627.o if test "zfile32d473316627.o" != "z"; then \ if test -e "file32d473316627-win.def"; then \ echo g++ -shared -s -static-libgcc -o file32d473316627.dll file32d473316627-win.def file32d473316627.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64" -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \ g++ -shared -s -static-libgcc -o file32d473316627.dll file32d473316627-win.def file32d473316627.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64" -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \ else \ echo EXPORTS > tmp.def; \ nm file32d473316627.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \ echo g++ -shared -s -static-libgcc -o file32d473316627.dll tmp.def file32d473316627.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64" -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \ g++ -shared -s -static-libgcc -o file32d473316627.dll tmp.def file32d473316627.o "D:/RCompile/CRANpkg/lib/4.6/rstan/lib/x64/libStanServices.a" -L"D:/RCompile/CRANpkg/lib/4.6/StanHeaders/libs/x64" -lStanHeaders -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64" -ltbb -L"D:/RCompile/CRANpkg/lib/4.6/RcppParallel/libs/x64" -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.6/RcppParallel/lib/x64 -ltbb -ltbbmalloc -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools45/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \ rm -f tmp.def; \ fi \ fi make[1]: Leaving directory '/d/temp/2026_04_17_01_50_00_1722/RtmpqSFukr' Quitting from native_discoveries.Rmd:71-73 [setting_model] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `sink()`: ! invalid connection --- Backtrace: ▆ 1. └─rstan::stan_model(model_file) 2. └─rstan:::cxxfunctionplus(...) 3. └─base::sink(type = "output") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'native_discoveries.Rmd' failed with diagnostics: invalid connection --- failed re-building 'native_discoveries.Rmd' --- re-building 'simulations.Rmd' using rmarkdown --- finished re-building 'simulations.Rmd' SUMMARY: processing the following file failed: 'native_discoveries.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-devel-windows-x86_64