When using the TopDom method, or this TopDom package, please cite:
Shin H, Shi Y, Dai C, Tjong H, Gong K, Alber F, Zhou XJ (2016). “TopDom: an efficient and deterministic method for identifying topological domains in genomes.” Nucleic Acids Research, 44(7), e70. doi:10.1093/nar/gkv1505, https://doi.org/10.1093/nar/gkv1505.
Bengtsson H, Shin H, Lazaris H, Hu G, Zhou X (2020). R Package TopDom: An Efficient and Deterministic Method for Identifying Topological Domains in Genomes. R package version 0.9.1-9000, https://github.com/HenrikBengtsson/TopDom.
Corresponding BibTeX entries:
@Article{,
author = {Hanjun Shin and Yi Shi and Chao Dai and Harianto Tjong
and Ke Gong and Frank Alber and Xianghong Jasmine Zhou},
title = {TopDom: an efficient and deterministic method for
identifying topological domains in genomes},
journal = {Nucleic Acids Research},
volume = {44},
number = {7},
pages = {e70},
year = {2016},
doi = {10.1093/nar/gkv1505},
url = {https://doi.org/10.1093/nar/gkv1505},
}
@Manual{,
title = {R Package TopDom: An Efficient and Deterministic Method
for Identifying Topological Domains in Genomes},
author = {Henrik Bengtsson and Hanjun Shin and Harris Lazaris and
Gangqing Hu and Xianghong Zhou},
year = {2020},
note = {R package version 0.9.1-9000},
url = {https://github.com/HenrikBengtsson/TopDom},
}