SI                      Example of serial interval distribution of
                        influenza
coef.hhdynamics_fit     Extract model coefficients from hhdynamics_fit
create_wide_data        Create a wide format of household data
household_dynamics      Fit a household transmission model via MCMC
inputdata               Example of input data
para                    Example of parameter vector for the main model
plot.hhdynamics_fit     Plot method for hhdynamics_fit objects
plot_attack_rate        Plot secondary attack rates
plot_covariates         Forest plot of covariate effects
plot_diagnostics        MCMC diagnostic plots
plot_household          Plot household infection timeline
plot_transmission       Plot transmission probability over time since
                        onset
print.hhdynamics_fit    Print method for hhdynamics_fit
print.summary.hhdynamics_fit
                        Print method for summary.hhdynamics_fit
run_MCMC                Run the MCMC for the household transmission
                        model
simulate_data           Simulate household transmission data
summary.hhdynamics_fit
                        Summary method for hhdynamics_fit
table_attack_rates      Table of secondary attack rates
table_covariates        Table of covariate effects (odds ratios)
table_parameters        Table of transmission parameter estimates
