Families                Additional families
GetResponse.tinyVAST    Get response
add_mesh_covariates     Add mesh covariates to vertices and triangles
add_predictions         Add predictions to data-list
alaska_sponge_coral_fish
                        Data to analyze sponge-coral-fish associations
atlantic_yellowtail     Northwest Atlantic yellowtail
bering_sea              Survey domain for the eastern and northern
                        Bering Sea surveys
bering_sea_capelin_forecasts
                        Data to demonstrate probabilistic forecasting
bering_sea_pollock_ages
                        Survey catch-rates at age for Alaska pollock in
                        the Eastern and Northern Bering Sea
bering_sea_pollock_vast
                        Estimated proportion-at-age for Alaska pollock
                        using VAST
cAIC                    Calculate conditional AIC
classify_variables      Classify variables path
condition_and_density   Condition and density example
conditional_gmrf        Conditional simulation from a GMRF
deviance_explained      Calculate deviance explained
get_data.tinyVAST       Get data
integrate_output        Integration for target variable
logLik.tinyVAST         Extract the (marginal) log-likelihood of a
                        tinyVAST model
make_dsem_ram           Make a RAM (Reticular Action Model)
make_eof_ram            Make a RAM (Reticular Action Model)
make_sem_ram            Make a RAM (Reticular Action Model) from a SEM
                        (structural equation model)
parse_path              Parse path
predict.tinyVAST        Predict using vector autoregressive
                        spatio-temporal model
print.tinyVAST          print summary of tinyVAST model
project                 Project tinyVAST to future times (EXPERIMENTAL)
red_grouper_diet        Data to demonstrate model-based diet
                        proportions
red_snapper             Presence/absence, count, and biomass data for
                        red snapper
red_snapper_shapefile   Shapefile for red snapper analysis
reload_model            Reload a previously fitted model
residuals.tinyVAST      Calculate deviance or response residuals for
                        tinyVAST
rmvnorm_prec            Multivariate Normal Random Deviates using
                        Sparse Precision
rotate_pca              Rotate factors to match Principal-Components
                        Analysis
salmon_returns          North Pacific salmon returns
sample_variable         Sample from predictive distribution of a
                        variable
sanity                  Sanity check of a tinyVAST model
sea_ice                 Arctic September sea ice concentrations
sfnetwork_evaluator     Construct projection matrix for stream network
sfnetwork_mesh          Make mesh for stream network
simulate.tinyVAST       Simulate new data from a fitted model
simulate_sfnetwork      Simulate GMRF for stream network
spatial_cor             Approximate spatial correlation
summary.tinyVAST        summarize tinyVAST
term_covariance         Extract covariance
tinyVAST                Fit vector autoregressive spatio-temporal model
tinyVASTcontrol         Control parameters for tinyVAST
vcov.tinyVAST           Extract Variance-Covariance Matrix
