R: Diversity-Interactions (DI) Models

# Diversity-Interactions (DI) Models

## Documentation for package ‘DImodels’ version 1.3.3

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package README

## Help Pages

DImodels-package | Diversity-Interactions (DI) Models
add_name_check | Internal Functions
AIC.DI | Methods for 'DI' Objects
AIC2 | Internal Functions
AICc | Internal Functions
AICc.default | Internal Functions
AICc.DI | Methods for 'DI' Objects
AICcsel_autoDI | Internal Functions
AICsel_autoDI | Internal Functions
anova.DI | Methods for 'DI' Objects
anovaDIglm | Internal Functions
anova_glmlist | Internal Functions
autoDI | Automated Diversity-Interactions Model Fitting
autoDI_step0 | Internal Functions
autoDI_step1 | Internal Functions
autoDI_step2 | Internal Functions
autoDI_step3 | Internal Functions
autoDI_step4 | Internal Functions
Bell | The "Bell" Dataset
BIC.DI | Methods for 'DI' Objects
BIC2 | Internal Functions
BICc | Internal Functions
BICc.default | Internal Functions
BICc.DI | Methods for 'DI' Objects
BICcsel_autoDI | Internal Functions
BICsel_autoDI | Internal Functions
compare_communities | Compare communities and assign compact letter displays (CLD)
contrasts_DI | Compute contrasts for Diversity Interactions (DI) models
contrast_matrix | Compute contrasts for Diversity Interactions (DI) models
describe_model | Describe DI models
design_a | The "design_a" Dataset
design_b | The "design_b" Dataset
DI | Diversity-Interactions Model Fitting
DImodels | Diversity-Interactions (DI) Models
DI_ADD | Diversity-Interactions Model Fitting
DI_ADD_treat | Diversity-Interactions Model Fitting
DI_AV | Diversity-Interactions Model Fitting
DI_AV_treat | Diversity-Interactions Model Fitting
DI_compare | Compare a Fitted Diversity-Interactions Model to the Reference Model
DI_CUSTOM | Diversity-Interactions Model Fitting
DI_data | Data manipulation function
DI_data_ADD | Data manipulation function
DI_data_E_AV | Data manipulation function
DI_data_FG | Data manipulation function
DI_data_fullpairwise | Data manipulation function
DI_data_manipulation | Data manipulation function
DI_data_prepare | Data manipulation function
DI_E | Diversity-Interactions Model Fitting
DI_E_treat | Diversity-Interactions Model Fitting
DI_FG | Diversity-Interactions Model Fitting
DI_FG_treat | Diversity-Interactions Model Fitting
DI_FULL | Diversity-Interactions Model Fitting
DI_FULL_treat | Diversity-Interactions Model Fitting
DI_ID | Diversity-Interactions Model Fitting
DI_ID_treat | Diversity-Interactions Model Fitting
DI_matrix_check | Internal Functions
DI_reference | Internal Functions
DI_STR | Diversity-Interactions Model Fitting
DI_STR_treat | Diversity-Interactions Model Fitting
DI_theta | Diversity-Interactions Model Fitting
extract | Extract terms from a DI or autoDI model object
extract.autoDI | Extract terms from a DI or autoDI model object
extract.DI | Extract terms from a DI or autoDI model object
fortify.DI | Methods for 'DI' Objects
get_community | Internal Functions
get_P_indices | Internal Functions
get_theta_cols | Internal Functions
logLik.DI | Methods for 'DI' Objects
namesub_autoDI | Internal Functions
namesub_DI | Internal Functions
predict.DI | Predict Method for Diversity-Interactions (DI) Models
proflik_theta | Internal Functions
reftest_autoDI | Internal Functions
richness_vs_DI | Comparing the Richness Model with DI Alternatives
sim0 | The Simulated "sim0" Dataset
sim0_design | The "sim0_design" Dataset
sim1 | The Simulated "sim1" Dataset
sim2 | The Simulated "sim2" Dataset
sim3 | The Simulated "sim3" Dataset
sim4 | The Simulated "sim4" Dataset
sim5 | The Simulated "sim5" Dataset
Switzerland | The "Switzerland" Dataset
test_autoDI | Internal Functions
theta_CI | Compute Confidence Interval for Theta
theta_index_matching | Internal Functions
update_DI | Update DI function call