R: A Data Manipulation and Analysis Package for Calcium Indicator Data

# A Data Manipulation and Analysis Package for Calcium Indicator Data

## Documentation for package ‘GCalcium’ version 1.0.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package README

## Help Pages

averaged_trials | Averages signals across trials
avg_curve_slope | Get average curve slopes
between_trial_change | Compare mean activity between trials
centered_AUC | Compute centered area under curve
consecutive_trial_change | Compare mean activity in consecutive trials
find_peaks | Get peaks/valleys in waveform data
format_data | Reformat and label data into GCalcium format
GCaMP | Pre-filtered GCaMP calcium activity waveforms
inflect_points | Find inflection pooints
inflect_points_df | Find inflection points and curve numbers
moving_window | Summarize data within windows of time
perc_baseline | Find the percent change from baseline
plot_trials | Plot specified trials
within_trial_change | Get mean activity change within a trial
z_score | Transform values into z scores