R: The Analysis of Biological Data

# The Analysis of Biological Data

## Documentation for package ‘abd’ version 0.2-8

- DESCRIPTION file
- Code demos. Use demo() to run them.

## Help Pages

A B C D E F G H I J K L M N O P R S T V W Y Z

abd-package | Data sets from The Analysis of Biological Data

## -- A --

abd | Data sets from The Analysis of Biological Data
abdData | Find data in _Analysis of Biological Data_
AlgaeCO2 | Carbon Dioxide and Growth Rate in Algae
Antilles | Antilles Bird Immigration Dates
Aspirin | Effects of Aspirin on Cancer Rates

## -- B --

BeeGenes | Foraging Gene Expression
BeeLifespans | Bee Lifespans
Beetles | Beetle Wings and Horns
BirdSexRatio | Sex Ratios in Birds
Blackbirds | Testosterone Levels in Blackbirds
BodyFatHeatLoss | Heat Loss and Body Fat
BrainExpression | Proteolipid Protein 1 Gene Expression
BrookTrout | Salmon Survival in the Presence of Brook Trout
BrookTrout2 | Salmon Survival in the Presence of Brook Trout

## -- C --

Cavalry | Deaths from Horse Kicks
Chickadees | Alarm Calls in Chickadees
ChimpBrains | Brodmann's Area 44 in Chimps
Cichlids | Cichlid Mating Preference
CichlidsGnRH | GnRH Levels in Cichlids
Clearcuts | Biomass Change in Rainforests near Clearcuts
CocaineDopamine | Effects of Cocaine on Dopamine Receptors
col.abd | Lattice theme for Analysis of Biological Data
col.abd,theme.abd | Lattice theme for Analysis of Biological Data
Convictions | Frequency of Convictions for a Cohort of English Boys
ConvictionsAndIncome | Convictions and Income Level in a Cohort of English Boys
Crickets | Immunity and Sperm Viability in Crickets

## -- D --

DaphniaLongevity | Daphnia Longevity
DaphniaResistance | Daphnia Resistance to Cyanobacteria
dataInfo | 'abd' Data Sets
DayOfBirth | Day of Birth
DEET | DEET and Mosquito Bites
DesertBirds | Desert Bird Census Data
Dioecy | Dioecy vs. Monomorphism in Plants
Dolphins | Dolphin Swimming Behavior
DungBeetles | Heritability of Body Condition in Dung Beetles

## -- E --

Earthworms | Earthworm Diversity and Soil Nitrogen Levels
Earwigs | Earwig Density and Forceps
Eelgrass | Eelgrass Genotypes
ElectricFish | Electric Fish
ElVerde | Diet Breadth in a Rainforest Community
EndangeredSpecies | Endangered and Threatened Species

## -- F --

FingerRatio | 2D:4D Finger Ratio
Fireflies | Spermatophore Mass in Fireflies
FireflyFlash | Firefly Flash Duration
FlycatcherPatch | Forehead Patch Size in Collared Flycatachers
FlyTestes | Testes Size in Flies

## -- G --

GeneRegulation | Gene Regulation in Saccharomyces
GlidingSnakes | GlidingSnakes
GodwitArrival | Godwit Arrival Dates
Grassland | Grassland Diversity
GreatTitMalaria | Malaria in Populations of Great Tit
Greenspace | Diversity in Urban Green Space
Guppies | Ornamentation and Attractiveness in Guppies

## -- H --

Hemoglobin | Hemoglobin Levels in High Altitude Populations
HippocampusLesions | Memory and the Hippocampus
histochart | Histogram from tabulated data
HornedLizards | Horn Length and Predation Status of Horned Lizards
HumanBodyTemp | Human Body Temperature
HumanGeneLengths | Human Gene Lengths
Hurricanes | Intense Hurricanes

## -- I --

Iguanas | Iguana Body Length Changes
IntertidalAlgae | Intertidal Algae

## -- J --

JetLagKnees | Circadian Rhythm Phase Shift

## -- K --

KenyaFinches | Body Mass and Beak Length in Three Species of Finches in Kenya

## -- L --

LanguageBrains | Brain Structure in Bilingual Humans
LarvalFish | Exploited Larval Fish
Lefthanded | Left-handedness and Rates of Violence
LionCubs | Time to Reproduction in Female Lions
LionNoses | Lion Age and Nose Coloration
LiverPreparation | Liver Preparation
LizardBite | Bite Force in Collard Lizards
LizardSprint | Sprint Speeds in Canyon Lizards
Lobsters | Lobster Orientation
LodgepolePines | Lodgepole Pine Cone Masses
LupusMice | Autoimmune Reactivity in Lupus-prone Mice
Lynx | Population Cycles of Lynx in Canada 1752-1819

## -- M --

MarineReserve | Marine Reserve Biomass
MassExtinctions | Mass Extinction Frequency
MoleRats | Energy Expenditure in Mole Rats
Mosquitoes | Body Size in Anopheles Mosquitoes
MouseEmpathy | Mouse Empathy

## -- N --

NeanderthalBrains | Cranial Capacity in Neanderthals and Modern Humans
NematodeLifespan | Effects of Trimethadione on Lifespan in Nematodes
NeotropicalTrees | Photosynthesis in Neotropical Trees
Newts | Tetrodotoxin Resistance in Garter Snakes
NorthSeaCod | Atlantic Cod Recruits
NoSmokingDay | No Smoking Day

## -- O --

OstrichTemp | Ostrich Body and Brain Temperatures

## -- P --

Penguins | Penguin Heart Rate
PlantPersistence | Population Persistence Times
Pollen | Sterility in Hybrid Pollens
Powerball | Powerball Tickets Sold
PrimateMetabolism | Primate Metabolic Rates
PrimateWBC | Primate White Blood Cell Counts and Promiscuity
ProgesteroneExercise | Progesterone and Exercise
Pseudoscorpions | Multiple Mating in Pseudoscorpions
Pufferfish | Pufferfish Mimicry

## -- R --

Rattlesnakes | Temperature Change and Meal Size in Rattlesnakes
Rigormortis | Rigormortis and Time of Death
RopeTrick | Indian Rope Trick

## -- S --

SagebrushCrickets | Sagebrush Cricket Mating Times
SalmonColor | Pacific Salmon Color
Seedlings | Number of Seedlings Per Quadrat
Selection | Data for Meta-analysis
SexualSelection | Sexual Conflict
ShadParasites | Shad Parasites
ShrinkingSeals | Seal Body Lengths and Age
ShuttleDisaster | Ambient Temperature and O-Ring Failures
Silversword | Rate of Speciation in Silverswords
SleepAndPerformance | Sleep and Learning
SockeyeFemales | Body Masses of Female Sockeye Salmon
Sparrows | Lifetime Reproductive Success in House Sparrows
SpiderColonies | Social Spiders
SpiderSpeed | Spider Running Speeds after Amputation
Stalkies1 | Eye Widths in Stalk-Eyed Flies
Stalkies2 | Stalk-eyed Fly Eyespan
SticklebackPlates | Number of Lateral Plates in Sticklebacks
SticklebackPreference | Mating Preferences in Sticklebacks
Sumo | Sumo Wrestling Wins
SyrupSwimming | Syrup Swimming

## -- T --

TeenDeaths | Causes of Teenage Deaths
Telomeres | Telomere Shortening
theme.abd | Lattice theme for Analysis of Biological Data
TimeOfDeath | Hypoxanthine and Time Since Death
Toads | Right-handed Toads
Tobacco | Flower Length in Tobacco Plants
Tobacco2 | Flower Length in Tobacco Plants
ToothAge | Radioactive Teeth
TreeSeedlings | Tree Seedlings and Sunflecks
Trematodes | Frequencies of Fish Eaten by Trematode Infection Level
Trillium | Trillium Recruitment near Clearcuts
Truffles | Truffle Distribution
TsetseLearning | Dietary Learning in Tsetse Flies
TwoKids | Number of Boys in Two-Child Families

## -- V --

VampireBites | Vampire Bat Bites
VasopressinVoles | Vasopressin Manipulation in the Meadow Vole
Vines | Climbing Vines
VoleDispersal | Home Range Size in Field Voles

## -- W --

WalkingStickFemurs | Walking Stick Femur Length
WalkingStickHeads | Walking Stick Head Width
WeddellSeals | Energetic Cost of Diving
WillsDebates | Presidential "Wills"
WillsPresidents | Presidential "Wills"
WolfTeeth | Wolf Tooth Measurements
Wolves | Inbreeding in Wolves
WorldCup | World Cup Goals
WrasseSexes | Distribution of Wrasses

## -- Y --

YeastGenes | Yeast Regulatory Genes

## -- Z --

ZebraFinchBeaks | Mate Preference in Zebra Finches
ZebraFinches | Zebra Finch Carotenoids
ZooMortality | Home Range Size and Mortality
Zooplankton | Zooplankton Depredation