available_results       Extract final configurations into a data frame
cluster_overlap         Create a table of module overlap for two
                        clusterings
fast_cor                Fast computation of correlation
find_module_sizes       Determine module sizes
get_avg_num_regulators
                        Get the average number of active regulators per
                        module
get_num_final_configs   Return the number of final configurations
get_rand_indices        Compute Rand indices
get_regulator_list      Return list of regulator genes
get_target_gene_modules
                        Extract target gene modules for given
                        penalization parameters
kmeanspp                Perform the k-means++ algorithm
plot_module_count_helper
                        Plot average silhouette scores and average
                        predictive R^2
plot_regulator_network
                        Plotting the regulatory table from scregclust
                        as a directed graph
plot_silhouettes        Plot individual silhouette scores
scregclust              Uncover gene modules and their regulatory
                        programs from single-cell data
scregclust_format       Package data before clustering
