Last updated on 2025-11-21 09:49:08 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.74 | 245.49 | 259.23 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.01 | 282.68 | 292.69 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 70.00 | 267.40 | 337.40 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 82.00 | 336.78 | 418.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.55 | 253.78 | 269.33 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.55 | 304.46 | 319.01 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 14.00 | 241.00 | 255.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 20.00 | 226.00 | 246.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 230.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [89s/181s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.870, system: 0.117, elapsed: 3.305 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.763, system: 0.301, elapsed: 28.736 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.028, elapsed: 0.860 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.273, system: 0.371, elapsed: 12.073 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.008, elapsed: 0.424 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.884, system: 0.876, elapsed: 46.748 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.702, system: 0.084, elapsed: 4.433 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.630, system: 0.256, elapsed: 18.108 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.027, elapsed: 0.411 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.477, system: 0.456, elapsed: 9.423 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.013, elapsed: 0.450 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.767, system: 0.887, elapsed: 34.161 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.930, system: 0.142, elapsed: 3.775 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.617, system: 0.278, elapsed: 17.731 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.013, elapsed: 0.409 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.978, system: 0.240, elapsed: 8.353 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.016, elapsed: 0.459 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.255, system: 0.299, elapsed: 1.930 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.822, system: 1.047, elapsed: 34.084 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.703, system: 0.069, elapsed: 3.792 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.773, system: 0.276, elapsed: 19.784 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.020, elapsed: 0.421 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.056, system: 0.245, elapsed: 9.028 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.004, elapsed: 0.325 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.887, system: 0.602, elapsed: 21.797 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.481, system: 1.247, elapsed: 56.512 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/160s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.669, system: 0.063, elapsed: 4.062 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.453, system: 0.187, elapsed: 22.337 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.017, elapsed: 0.461 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.732, system: 0.240, elapsed: 9.008 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.424 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.799, system: 0.556, elapsed: 37.796 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.670, system: 0.066, elapsed: 3.709 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.643, system: 0.257, elapsed: 20.646 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.013, elapsed: 0.411 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.756, system: 0.197, elapsed: 7.380 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.299 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.976, system: 0.579, elapsed: 33.708 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.553, system: 0.031, elapsed: 2.834 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.468, system: 0.163, elapsed: 18.446 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.014, elapsed: 0.360 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.656, system: 0.199, elapsed: 6.142 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.006, elapsed: 0.269 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.089, system: 0.294, elapsed: 1.075 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.774, system: 0.740, elapsed: 30.311 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.532, system: 0.035, elapsed: 2.393 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.445, system: 0.113, elapsed: 16.432 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.017, elapsed: 0.350 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.984, system: 0.288, elapsed: 7.231 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.007, elapsed: 0.326 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.782, system: 0.743, elapsed: 20.100 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.753, system: 1.233, elapsed: 48.006 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64