Please cite 'calmate' and use of the CalMaTe method using the following reference:
Ortiz-Estevez, Maria, Aramburu, Ander, Bengtsson, Henrik, Neuvial, Pierre, Rubio, Angel (2012). “CalMaTe: A method and software to improve allele-specific copy number of SNP arrays for downstream segmentation.” Bioinformatics, 28(13), 1793–1794. doi:10.1093/bioinformatics/bts248.
Corresponding BibTeX entry:
@Article{OrtizEstevez2012,
author = {{Ortiz-Estevez} and {Maria} and {Aramburu} and {Ander}
and {Bengtsson} and {Henrik} and {Neuvial} and {Pierre} and
{Rubio} and {Angel}},
journal = {Bioinformatics},
title = {CalMaTe: A method and software to improve allele-specific
copy number of SNP arrays for downstream segmentation},
year = {2012},
number = {13},
pages = {1793--1794},
volume = {28},
publisher = {Oxford University Press},
doi = {10.1093/bioinformatics/bts248},
}