# Generated by roxygen2: do not edit by hand

S3method(plot,bayouMCMC)
S3method(plot,ssMCMC)
S3method(print,bayouFit)
S3method(print,bayouMCMC)
S3method(print,priorFn)
S3method(print,refFn)
S3method(print,ssMCMC)
S3method(summary,bayouMCMC)
export(Lposterior)
export(OU.lik)
export(OUphenogram)
export(OUwie2bayou)
export(bayou.checkModel)
export(bayou.lik)
export(bayou.makeMCMC)
export(bayou2OUwie)
export(cdpois)
export(combine.chains)
export(dataSim)
export(dhalfcauchy)
export(dloc)
export(dsb)
export(gelman.R)
export(identifyBranches)
export(load.bayou)
export(make.powerposteriorFn)
export(make.prior)
export(make.refFn)
export(makeBayouModel)
export(makeTransparent)
export(parmap.W)
export(pars2simmap)
export(phalfcauchy)
export(phenogram.density)
export(plotBayoupars)
export(plotBranchHeatMap)
export(plotOUtreesim)
export(plotRegimes)
export(plotShiftSummaries)
export(plotSimmap.mcmc)
export(priorSim)
export(pull.pars)
export(qhalfcauchy)
export(rdpois)
export(rhalfcauchy)
export(rloc)
export(rsb)
export(set.burnin)
export(shiftSummaries)
export(simmapW)
import(MASS)
import(Rcpp)
import(ape)
import(assertthat)
import(coda)
import(denstrip)
import(fitdistrplus)
import(foreach)
import(geiger)
import(grDevices)
import(graphics)
import(mnormt)
import(phytools)
import(stats)
importFrom(utils,globalVariables)
importFrom(utils,read.table)
importFrom(utils,tail)
useDynLib(bayou)
