# Generated by roxygen2: do not edit by hand

S3method(plot,ehh)
S3method(plot,ehhs)
S3method(plot,furcation)
S3method(plot,haplen)
S3method(plot,haplohh)
S3method(subset,haplohh)
export(as.newick)
export(calc_candidate_regions)
export(calc_ehh)
export(calc_ehhs)
export(calc_furcation)
export(calc_haplen)
export(calc_pairwise_haplen)
export(calc_region_stats)
export(calc_sfs_tests)
export(data2haplohh)
export(distribplot)
export(extract_regions)
export(freqbinplot)
export(furcation)
export(haplen)
export(haplohh2sweepfinder)
export(ies2xpehh)
export(ihh2ihs)
export(ines2rsb)
export(make.example.files)
export(manhattanplot)
export(remove.example.files)
export(scan_hh)
export(scan_hh_full)
export(update_haplohh)
exportClasses(furcation)
exportClasses(haplen)
exportClasses(haplohh)
exportMethods(chr.name)
exportMethods(hap.names)
exportMethods(haplo)
exportMethods(mrk.names)
exportMethods(nhap)
exportMethods(nmrk)
exportMethods(positions)
import(rehh.data)
importFrom(grDevices,adjustcolor)
importFrom(graphics,abline)
importFrom(graphics,arrows)
importFrom(graphics,axis)
importFrom(graphics,curve)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,matplot)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,points)
importFrom(graphics,rect)
importFrom(graphics,segments)
importFrom(graphics,text)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,setClass)
importFrom(methods,validObject)
importFrom(stats,density)
importFrom(stats,dnorm)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(stats,p.adjust.methods)
importFrom(stats,pnorm)
importFrom(stats,qqnorm)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(utils,read.table)
importFrom(utils,unzip)
useDynLib(rehh, .registration = TRUE)
