R: Processing of Oxy-Bisulfite Microarray Data

# Processing of Oxy-Bisulfite Microarray Data

## Documentation for package ‘OxyBS’ version 1.5

- DESCRIPTION file

## Help Pages

diffBeta1 | First derivative of beta minus-log-pdf with respect to first parameter
diffBeta2 | First derivative of beta minus-log-pdf with respect to second parameter
exampleMethBS | Sample Data: Methylation (red) signals from conventional bisulfite conversion.
exampleMethOxBS | Sample Data: Methylation (red) signals from oxy-bisulfite conversion.
exampleUnmethBS | Sample Data: Unmethylated (green) signals from conventional bisulfite conversion.
exampleUnmethOxBS | Sample Data: Unmethylated (green) signals from oxy-bisulfite conversion.
fitOneOxBS | Fit one OxyBS result
fitOxBS | Fit OxyBS for one specimen
likeOxBS | Likelihood function for C/5mC/5hmC likelihood estimator
scoreOxBS | Score function for C/5mC/5hmC likelihood estimator