HQ_filter               Select high-quality data in GWAS datasets
QCGWAS-package          Quality Control of Genome Wide Association
                        Study Results
QC_GWAS                 Automated Quality Control of GWAS Results files
QC_histogram            Histogram(s) of expected and observed data
                        distribution
QC_plots                QQ and Manhattan plots
QQ_plot                 QQ plot(s) of expected vs. reported p-values
calc_kurtosis           Skewness and Kurtosis
check_P                 Checking GWAS p-values
convert_impstatus       Convert imputation-status values to the QCGWAS
                        standard
create_hapmap_reference
                        Create an allele-reference file from HapMap
                        data
filter_GWAS             Automated filtering and reformatting of GWAS
                        results files
gwa_sample              Sample dataset for the QCGWAS package
header_translations     Translation table for GWAS dataset headers
identify_column         Identify non-standard column names
intensity_plot          Generates an intensity plot from x, y datasets
load_GWAS               Easy loading of GWAS results files
match_alleles           Check and correct alleles in GWAS result files
plot_distribution       GWAS effect-Size distribution plot
plot_precision          GWAS Precision Plot
plot_regional           Regional Association Plot
plot_skewness           GWAS Skewness vs. Kurtosis Plot
save_log                Log entries for QC_GWAS
switch_strand           Convert alleles to the opposing DNA strand
translate_header        Translate column names into standard names
