PCSF                    Prize-collecting Steiner Forest (PCSF)
categorize_sex_sc       Compute sex-specific differentially expressed
                        genes (DEGs) per category
categorized_enrich_sc   Perform Pathway Enrichment Analysis for
                        Pre-Categorized Differentially Expressed Genes
                        (DEGs)
construct_ppi_pcsf      Construct Protein-protein interaction Network
                        using Prize-Collecting Steiner Forest
convertdf2enr           Convert Data Frame to enrichResult
generate_boxplot        Generate Boxplots for Expression Data
generate_cat_report     Generate a Comprehensive Analysis Report
generate_report         Generate a Comprehensive Analysis Report
get_string_network      Download and Process STRING Protein-Protein
                        Interaction Network
identify_sex_specific_genes
                        Identify sex-specific and sex-dimorphic genes
improved_pathway_enrichment
                        Improved Pathway Enrichment Analysis
plot_network            Plot a Condition-Specific protein-protein
                        interaction network with DEG Annotations
sex_interaction_analysis_bulk
                        Perform Sex-Phenotype Interaction Analysis for
                        Bulk Data (Interaction Term)
sex_interaction_analysis_sc
                        Perform Sex-Phenotype Interaction Analysis for
                        Single-Cell Data
sex_stratified_analysis_bulk
                        Perform differential expression analysis within
                        each sex
sex_stratified_analysis_sc
                        Compute sex-specific differentially expressed
                        genes (DEGs)
visualize_network       Visualize Gene Regulatory Network with Pie
                        Charts
