Package: plinkFile
Title: 'PLINK' (and 'GCTA') File Helpers
Version: 0.2.1
Authors@R: person("Xiaoran", "Tong", email = "xiaoran.tong.cn@gmail.com", role = c("aut", "cre"))
Description: Reads/write binary genotype file compatible with 'PLINK' <https://www.cog-genomics.org/plink/1.9/input#bed> into/from a R matrix; traverse genotype data one windows of variants at a time, like apply() or a for loop; reads/writes genotype relatedness/kinship matrices created by 'PLINK' <https://www.cog-genomics.org/plink/1.9/distance#make_rel> or 'GCTA' <https://cnsgenomics.com/software/gcta/#MakingaGRM> into/from a R square matrix. It is best used for bringing data produced by 'PLINK' and 'GCTA' into R workflow.
Depends: R (>= 3.5.0)
License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
NeedsCompilation: no
Packaged: 2023-11-24 00:17:02 UTC; xt
Author: Xiaoran Tong [aut, cre]
Maintainer: Xiaoran Tong <xiaoran.tong.cn@gmail.com>
Repository: CRAN
Date/Publication: 2023-11-24 12:00:04 UTC
Built: R 4.6.0; ; 2026-04-25 21:12:11 UTC; unix
