Package: ADPclust
Type: Package
Title: Fast Clustering Using Adaptive Density Peak Detection
Version: 0.7
Authors@R: c(person("Yifan (Ethan) Xu", email = "ethan.yifanxu@gmail.com", role = c("aut","cre")), person("Xiao-Feng", "Wang", email = "wangx6@ccf.org", role = "aut"))
Description: An implementation of ADPclust clustering procedures (Fast
    Clustering Using Adaptive Density Peak Detection). The work is built and
    improved upon the idea of Rodriguez and Laio (2014)<DOI:10.1126/science.1242072>. 
    ADPclust clusters data by finding density peaks in a density-distance plot 
    generated from local multivariate Gaussian density estimation. It includes 
    an automatic centroids selection and parameter optimization algorithm, which 
    finds the number of clusters and cluster centroids by comparing average 
    silhouettes on a grid of testing clustering results; It also includes a user 
    interactive algorithm that allows the user to manually selects cluster 
    centroids from a two dimensional "density-distance plot". Here is the 
    research article associated with this package: "Wang, Xiao-Feng, and 
    Yifan Xu (2015)<DOI:10.1177/0962280215609948> Fast clustering using adaptive 
    density peak detection." Statistical methods in medical research". url:
    http://smm.sagepub.com/content/early/2015/10/15/0962280215609948.abstract. 
Depends: R (>= 3.0.0),
Imports: dplyr, cluster, fields, knitr
URL: https://github.com/ethanyxu/ADPclust
BugReports: https://github.com/ethanyxu/ADPclust/issues
VignetteBuilder: knitr
License: GPL (>= 2)
LazyData: true
Suggests: rmarkdown, testthat
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2016-10-14 14:59:52 UTC; ethan.xu
Author: Yifan (Ethan) Xu [aut, cre],
  Xiao-Feng Wang [aut]
Maintainer: Yifan (Ethan) Xu <ethan.yifanxu@gmail.com>
Repository: CRAN
Date/Publication: 2016-10-15 11:37:01
Built: R 4.6.0; ; 2026-01-31 04:44:41 UTC; windows
