% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/deconvo_tme.R
\docType{data}
\name{tme_deconvolution_methods}
\alias{tme_deconvolution_methods}
\title{TME Deconvolution Methods}
\format{
A named character vector where names are display names and values
  are internal method names.
}
\usage{
tme_deconvolution_methods
}
\value{
Named character vector of available deconvolution methods.
}
\description{
A named vector of supported tumor microenvironment (TME) deconvolution
methods in the IOBR package.
}
\details{
The methods currently supported are:
\itemize{
  \item `mcpcounter`: MCP-counter for immune and stromal cell populations
  \item `epic`: EPIC for immune, stromal, and cancer cell fractions
  \item `xcell`: xCell for 64 immune and stromal cell types
  \item `cibersort`: CIBERSORT for 22 immune cell types
  \item `cibersort_abs`: CIBERSORT in absolute mode
  \item `ips`: Immunophenoscore calculation
  \item `estimate`: ESTIMATE for stromal/immune/estimate scores
  \item `svr`: Support Vector Regression (custom reference)
  \item `lsei`: Least Squares with Equality/Inequality constraints
  \item `timer`: TIMER for cancer-specific immune estimation
  \item `quantiseq`: quanTIseq for RNA-seq immune deconvolution
}
}
\examples{
# List all available TME deconvolution methods
tme_deconvolution_methods

# Get internal method name for a specific method
tme_deconvolution_methods["MCPcounter"]
}
\keyword{datasets}
