% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/data_doc.R
\docType{data}
\name{signature_collection}
\alias{signature_collection}
\title{Gene signature collection for pathway and immune analysis}
\format{
A named list of length 323. Each element is a character vector of
  gene symbols. Representative entries include:
  \describe{
    \item{CD_8_T_effector}{Markers of CD8\eqn{^{+}} effector T cells.}
    \item{DDR}{DNA damage response and repair genes.}
    \item{Immune_Checkpoint}{Immune checkpoint molecules.}
    \item{CellCycle_Reg}{Core regulators of cell-cycle progression.}
    \item{Mismatch_Repair}{Mismatch-repair pathway genes.}
    \item{TMEsocreA_CIR}{TME-related signature used in TMEscore analysis.}
    \item{...}{Additional signatures are included in the list but are not
      individually listed here; all follow the same structure.}
  }
}
\usage{
data(signature_collection)
}
\description{
A named list of gene signatures used in the IOBR package for immune
deconvolution, pathway scoring, functional annotation, and tumour
microenvironment (TME) characterization. Each element corresponds to a
predefined biological signature and contains a character vector of HGNC
gene symbols.
}
\examples{
data(signature_collection)
head(signature_collection)
}
\keyword{datasets}
