% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/run_real_data_study.R
\name{run_real_data_study}
\alias{run_real_data_study}
\title{Run a real-data study}
\usage{
run_real_data_study(
  dataset,
  seed = NULL,
  missing_props = seq(5, 50, 5),
  mechanisms = c("MCAR", "MAR"),
  reps = 1L,
  baseline_reps = 100L,
  max_ncomp = 12L,
  criteria = c("Q2-LOO", "Q2-10fold", "AIC", "AIC-DoF", "BIC", "BIC-DoF"),
  incomplete_methods = c("nipals_standard", "nipals_adaptative"),
  imputation_methods = c("mice", "knn", "svd"),
  folds = 10L,
  mar_y_bias = 0.8
)
}
\arguments{
\item{dataset}{A packaged dataset name or \code{misspls_dataset} object.}

\item{seed}{Optional base random seed.}

\item{missing_props}{Missing-data proportions as fractions or percentages.}

\item{mechanisms}{Missing-data mechanisms.}

\item{reps}{Number of replicate missingness draws for each mechanism and
proportion.}

\item{baseline_reps}{Number of repeated complete-data \verb{Q2-10fold} selections
used to determine \verb{t**}.}

\item{max_ncomp}{Maximum number of extracted components.}

\item{criteria}{Criteria evaluated on incomplete and imputed data.}

\item{incomplete_methods}{Incomplete-data NIPALS workflows.}

\item{imputation_methods}{Imputation methods.}

\item{folds}{Number of folds used by \code{"Q2-10fold"}.}

\item{mar_y_bias}{MAR bias parameter passed to \code{\link[=add_missingness]{add_missingness()}}.}
}
\value{
A data frame with one row per study run.
}
\description{
Run a real-data study
}
