ae8a8cdd2f88168bb0e9ce7ef0662089 *DESCRIPTION
e9de38227a3bfc6d39343b03336014c3 *NAMESPACE
70537c54577c8d8a55e20703b98fe0c3 *NEWS.md
178099d50573ee6b490e12bd77f08cfb *R/download.R
9c987059d43b83fd0270bb91706cb25b *R/generateTestTables.R
090640b51e348f3fad9e596a6ffd1455 *R/globals.R
ed205da06556ff8165cab57dbe9f1fde *R/patients.R
5be6a3ae55f4376905acdf4086010342 *R/patientsRemote.R
96855f64f3f211919f7bafb31fac5ead *R/sysdata.rda
0ecb8362d47a957c7013a4a8d0fce5f5 *R/useGithubAction.R
16cc478a5d3271a3cf2a3b3af3b2b85d *R/utilsCdm.R
22df8becdfd8f0bd270c03dd5701bee3 *R/visualisations.R
8ebce9f8588b13cf9429dbf32b5ea4b4 *README.md
71285fe8249c217a022448a3de416128 *build/vignette.rds
dd13b51353700f6dcdf10667c9723c0c *inst/cdmTableSpecifications/emptycdm_5.3/attribute_definition.parquet
21b6baf22bc578642da765fba189f879 *inst/cdmTableSpecifications/emptycdm_5.3/care_site.parquet
7fb429992b5d988dc0c9b98a2e886100 *inst/cdmTableSpecifications/emptycdm_5.3/cdm_source.parquet
8f60ed3f75497cd582b92d4e3d799da7 *inst/cdmTableSpecifications/emptycdm_5.3/cohort_definition.parquet
41671be62a27087a8f18ec903401be97 *inst/cdmTableSpecifications/emptycdm_5.3/concept.parquet
5ed6e5a0c55345d7b24fd0d56bc991f8 *inst/cdmTableSpecifications/emptycdm_5.3/concept_ancestor.parquet
74ad6da818aa0e5df49731b2e4550290 *inst/cdmTableSpecifications/emptycdm_5.3/concept_class.parquet
bc5d4c6f7ab7250b5e5de140c1e5025a *inst/cdmTableSpecifications/emptycdm_5.3/concept_relationship.parquet
72e0af2f94d7d2dd1951d6597b8d1e94 *inst/cdmTableSpecifications/emptycdm_5.3/concept_synonym.parquet
e87a9cd52a27674966fbbb07155a88c1 *inst/cdmTableSpecifications/emptycdm_5.3/condition_era.parquet
fa880972ddddeb472bcce84cca2d9fa8 *inst/cdmTableSpecifications/emptycdm_5.3/condition_occurrence.parquet
de06506c8d4802f446ac6939c780dbba *inst/cdmTableSpecifications/emptycdm_5.3/cost.parquet
ac9bc03657e4847d0d9376eae6cbcae8 *inst/cdmTableSpecifications/emptycdm_5.3/death.parquet
4f63bc548ea8ece4835320b39fe5a219 *inst/cdmTableSpecifications/emptycdm_5.3/device_exposure.parquet
a2b0e00476711a5b7b7fe8a217bc00a2 *inst/cdmTableSpecifications/emptycdm_5.3/domain.parquet
c7e13c55b934203b59d5e0d0dd567ae8 *inst/cdmTableSpecifications/emptycdm_5.3/dose_era.parquet
c69227b379c3599ef4c2854391eb5d15 *inst/cdmTableSpecifications/emptycdm_5.3/drug_era.parquet
4b378f7497fc607a828529a18bec77dd *inst/cdmTableSpecifications/emptycdm_5.3/drug_exposure.parquet
a6086fc0e869d2776a19d1b27022afb6 *inst/cdmTableSpecifications/emptycdm_5.3/drug_strength.parquet
614fb75922a71e5fc5bb91ec9fa286a6 *inst/cdmTableSpecifications/emptycdm_5.3/fact_relationship.parquet
6b01d2374d3f6a4bd1e573462030d496 *inst/cdmTableSpecifications/emptycdm_5.3/location.parquet
a07b0ada7ec7675a360d847fe6dfc866 *inst/cdmTableSpecifications/emptycdm_5.3/measurement.parquet
23b314f10be7d61cc0de45f2da8989d9 *inst/cdmTableSpecifications/emptycdm_5.3/metadata.parquet
444c61099c4cf1817447f07569b2337c *inst/cdmTableSpecifications/emptycdm_5.3/note.parquet
a7187c7178bb82c2743ae069514452ab *inst/cdmTableSpecifications/emptycdm_5.3/note_nlp.parquet
2a1cc3a9d3d127a79e4cfd5587ede02a *inst/cdmTableSpecifications/emptycdm_5.3/observation.parquet
32020648d85d777690607ab600be5e5f *inst/cdmTableSpecifications/emptycdm_5.3/observation_period.parquet
d42d7e704a951ba338505245604d61a7 *inst/cdmTableSpecifications/emptycdm_5.3/payer_plan_period.parquet
2ccd753fb74e9fc373c43805eb59d10e *inst/cdmTableSpecifications/emptycdm_5.3/person.parquet
b29b3f7cc06cc8e458f788f6835a8ea6 *inst/cdmTableSpecifications/emptycdm_5.3/procedure_occurrence.parquet
b62c5e3042c03ea167c2217e7e008a43 *inst/cdmTableSpecifications/emptycdm_5.3/provider.parquet
545ec7d7b9e794883b6a18c1f66f3519 *inst/cdmTableSpecifications/emptycdm_5.3/relationship.parquet
1de89fbe5674c49e9b3a9dda35726b93 *inst/cdmTableSpecifications/emptycdm_5.3/source_to_concept_map.parquet
eb0973cba049d1bedc1a296aeee7d4c1 *inst/cdmTableSpecifications/emptycdm_5.3/specimen.parquet
15acfdfa9fa6ee78b8a56373a4c7cd50 *inst/cdmTableSpecifications/emptycdm_5.3/visit_detail.parquet
f2c5f3fb836ecbe4db29686133ae5322 *inst/cdmTableSpecifications/emptycdm_5.3/visit_occurrence.parquet
04390f1e07c89df75b14ce741a67e2db *inst/cdmTableSpecifications/emptycdm_5.3/vocabulary.parquet
21b6baf22bc578642da765fba189f879 *inst/cdmTableSpecifications/emptycdm_5.4/care_site.parquet
81c2c76bee3517ee1b7c8690c100e2e4 *inst/cdmTableSpecifications/emptycdm_5.4/cdm_source.parquet
5ee75e9a65795971346105cd621923a0 *inst/cdmTableSpecifications/emptycdm_5.4/cohort.parquet
8f60ed3f75497cd582b92d4e3d799da7 *inst/cdmTableSpecifications/emptycdm_5.4/cohort_definition.parquet
41671be62a27087a8f18ec903401be97 *inst/cdmTableSpecifications/emptycdm_5.4/concept.parquet
5ed6e5a0c55345d7b24fd0d56bc991f8 *inst/cdmTableSpecifications/emptycdm_5.4/concept_ancestor.parquet
74ad6da818aa0e5df49731b2e4550290 *inst/cdmTableSpecifications/emptycdm_5.4/concept_class.parquet
bc5d4c6f7ab7250b5e5de140c1e5025a *inst/cdmTableSpecifications/emptycdm_5.4/concept_relationship.parquet
72e0af2f94d7d2dd1951d6597b8d1e94 *inst/cdmTableSpecifications/emptycdm_5.4/concept_synonym.parquet
e87a9cd52a27674966fbbb07155a88c1 *inst/cdmTableSpecifications/emptycdm_5.4/condition_era.parquet
fa880972ddddeb472bcce84cca2d9fa8 *inst/cdmTableSpecifications/emptycdm_5.4/condition_occurrence.parquet
de06506c8d4802f446ac6939c780dbba *inst/cdmTableSpecifications/emptycdm_5.4/cost.parquet
ac9bc03657e4847d0d9376eae6cbcae8 *inst/cdmTableSpecifications/emptycdm_5.4/death.parquet
10d452aff83e5f7d36faa8b5c2ba969e *inst/cdmTableSpecifications/emptycdm_5.4/device_exposure.parquet
a2b0e00476711a5b7b7fe8a217bc00a2 *inst/cdmTableSpecifications/emptycdm_5.4/domain.parquet
c7e13c55b934203b59d5e0d0dd567ae8 *inst/cdmTableSpecifications/emptycdm_5.4/dose_era.parquet
c69227b379c3599ef4c2854391eb5d15 *inst/cdmTableSpecifications/emptycdm_5.4/drug_era.parquet
4b378f7497fc607a828529a18bec77dd *inst/cdmTableSpecifications/emptycdm_5.4/drug_exposure.parquet
a6086fc0e869d2776a19d1b27022afb6 *inst/cdmTableSpecifications/emptycdm_5.4/drug_strength.parquet
5f19c21828ac8fcd6e0161a5f69984ef *inst/cdmTableSpecifications/emptycdm_5.4/episode.parquet
ea9060632460b79ed207547d6693ffe8 *inst/cdmTableSpecifications/emptycdm_5.4/episode_event.parquet
614fb75922a71e5fc5bb91ec9fa286a6 *inst/cdmTableSpecifications/emptycdm_5.4/fact_relationship.parquet
cc7517beb9b4a2f037aa47a28b220358 *inst/cdmTableSpecifications/emptycdm_5.4/location.parquet
1f9531359828328b4c9cc2e95186b9c8 *inst/cdmTableSpecifications/emptycdm_5.4/measurement.parquet
e4b172c2e437b56956c11f0437fa3085 *inst/cdmTableSpecifications/emptycdm_5.4/metadata.parquet
df029da2da02c758b70b9d4e7011fbdf *inst/cdmTableSpecifications/emptycdm_5.4/note.parquet
a7187c7178bb82c2743ae069514452ab *inst/cdmTableSpecifications/emptycdm_5.4/note_nlp.parquet
53c3929ba325dc75fed743dac28fac37 *inst/cdmTableSpecifications/emptycdm_5.4/observation.parquet
32020648d85d777690607ab600be5e5f *inst/cdmTableSpecifications/emptycdm_5.4/observation_period.parquet
d42d7e704a951ba338505245604d61a7 *inst/cdmTableSpecifications/emptycdm_5.4/payer_plan_period.parquet
2ccd753fb74e9fc373c43805eb59d10e *inst/cdmTableSpecifications/emptycdm_5.4/person.parquet
e4431795297098f3ae2bd739f4d81113 *inst/cdmTableSpecifications/emptycdm_5.4/procedure_occurrence.parquet
b62c5e3042c03ea167c2217e7e008a43 *inst/cdmTableSpecifications/emptycdm_5.4/provider.parquet
545ec7d7b9e794883b6a18c1f66f3519 *inst/cdmTableSpecifications/emptycdm_5.4/relationship.parquet
1de89fbe5674c49e9b3a9dda35726b93 *inst/cdmTableSpecifications/emptycdm_5.4/source_to_concept_map.parquet
eb0973cba049d1bedc1a296aeee7d4c1 *inst/cdmTableSpecifications/emptycdm_5.4/specimen.parquet
5aed402659a7f3e010fb2ddd394b9a0f *inst/cdmTableSpecifications/emptycdm_5.4/visit_detail.parquet
947995ded74f3fbf7b46aa48e47b8a19 *inst/cdmTableSpecifications/emptycdm_5.4/visit_occurrence.parquet
04390f1e07c89df75b14ce741a67e2db *inst/cdmTableSpecifications/emptycdm_5.4/vocabulary.parquet
13ab4b9373b7acba5e253b0227e1bc61 *inst/doc/gettingStarted.R
923d30559017f56c27f0e97d59aa82a2 *inst/doc/gettingStarted.Rmd
3b6499e503180ca3e587f1808b1d3a07 *inst/doc/gettingStarted.html
8456dcbe2329bcb83f9c8a387e08b317 *inst/doc/githubActions.R
c8707225e19d8458f7d9a0114c04f4a8 *inst/doc/githubActions.Rmd
9ae067d2e4bb10a3814ff1ba2e64622a *inst/doc/githubActions.html
38dd1f46abf082f2d867a974b0913f0f *inst/doc/remoteDatabases.R
8e49fdb884108ccefbf191ad7fa30132 *inst/doc/remoteDatabases.Rmd
05b8ba2b9a41e31778d0cedd181c6065 *inst/doc/remoteDatabases.html
be2d51137cc1356509396b93b5a2309f *inst/extdata/icu_sample_population.xlsx
868bb9992f0952fbae66c8d14f5ccb18 *inst/extdata/mimic_sample/condition_occurrence.csv
990ad7a98640b9ff8c4919590287407f *inst/extdata/mimic_sample/drug_exposure.csv
c2ea425644e2ee6ab07b0f74ca55689d *inst/extdata/mimic_sample/measurement.csv
2ee8414f18da2c0a7f88a87f89e39db1 *inst/extdata/mimic_sample/observation_period.csv
9f232d5f58cc03b5ea70433fd20aa270 *inst/extdata/mimic_sample/person.csv
08025ec857cd8ba895b4af680668937e *inst/extdata/mimic_sample/visit_detail.csv
55a6647548c9d0e857eb6b3c686f4c6f *inst/extdata/mimic_sample/visit_occurrence.csv
12b2064983a1a764e3d93c7dad5936df *inst/extdata/testPatientsHepatitis.xlsx
7a1c98eb4d7f1b58b661d0f829ee3cf3 *inst/extdata/testPatientsRSV.xlsx
e0bc027348b7939adaa2e7f6ce725b57 *inst/extdata/test_cohorts/diazepam.json
b499d2b9dcf4a0f47f0919406823cb03 *inst/extdata/test_cohorts/hospitalisation.json
738bfc894a90f5db74caadfccfa23bda *inst/extdata/test_cohorts/icu_visit.json
76c4a0cf354d06275bbd0db3e7f9fc50 *inst/workflows/databricks-test.yml
c911b86443c2cd7210902ee5bfcaa439 *inst/workflows/postgresql-test.yml
5da82715627ff494b4e291ca9831da4a *inst/workflows/sqlserver-test.yml
359e71eee2742e4c05e65a5d799a2c05 *man/checkRemoteFileAvailable.Rd
9bddca252c730ba6d33274e421a58cb2 *man/checkTablesColumns.Rd
4fe9671e2f4440470ba0c44c15d716de *man/cleanupTestCdm.Rd
e7e7c708957846bb4b1614a588631f9c *man/downloadTestData.Rd
f804d57e36b1225495d9d53e692ab7a3 *man/generateTestTables.Rd
390045ee612de236af966abb830a760a *man/graphCohort.Rd
5eb3f0eddcd835674cbfd4076dbca9d2 *man/patientsCDM.Rd
36528ff74b0bca449c089d550d80d009 *man/readPatients.Rd
b47edc18752d2d6c9052c5fdbecaa60e *man/readPatients.csv.Rd
72f61f97c5e715e95039e6ef34b6b97d *man/readPatients.xl.Rd
325398109197d12bb471f48a9103ad14 *man/useGithubAction.Rd
f7c07828a8c98b06b784c12b174e536f *tests/testthat.R
be2d51137cc1356509396b93b5a2309f *tests/testthat/icu_sample_population.xlsx
868bb9992f0952fbae66c8d14f5ccb18 *tests/testthat/mimic_sample/condition_occurrence.csv
990ad7a98640b9ff8c4919590287407f *tests/testthat/mimic_sample/drug_exposure.csv
c2ea425644e2ee6ab07b0f74ca55689d *tests/testthat/mimic_sample/measurement.csv
2ee8414f18da2c0a7f88a87f89e39db1 *tests/testthat/mimic_sample/observation_period.csv
9f232d5f58cc03b5ea70433fd20aa270 *tests/testthat/mimic_sample/person.csv
08025ec857cd8ba895b4af680668937e *tests/testthat/mimic_sample/visit_detail.csv
55a6647548c9d0e857eb6b3c686f4c6f *tests/testthat/mimic_sample/visit_occurrence.csv
413633fdccf7054012bb15da4bb82ca6 *tests/testthat/test-databricks.R
e9b5a0353732de9bfb52b1763e531ead *tests/testthat/test-generateTestTable.R
ae369c07370cb90e62c5a199e40365b4 *tests/testthat/test-patients.R
6487b0e27c120bba4a90d52b0b1c3c0c *tests/testthat/test-patientsRemote.R
94a3ca78b0696d6cc712bf949b043c82 *tests/testthat/test-postgresql.R
99ceed69f2ec1e574dfe2ff35d94230e *tests/testthat/test-sqlserver.R
1271088854b78111695d6df2829a2d2a *tests/testthat/test-useGithubAction.R
c0d61bafe03d6a7871eee986c61e9045 *tests/testthat/test-utilsCdm.R
b9646f3326df1f81c9608f4efb66d47d *tests/testthat/testCases/mimic_sample.json
728aaf1462713cd2a8cec2000a49a6c4 *tests/testthat/testCases/pregnancy.json
d0b04054b16064c9a943e0fa328f5466 *tests/testthat/testCases/test.json
7a1c98eb4d7f1b58b661d0f829ee3cf3 *tests/testthat/testPatientsRSV.xlsx
8151773ebd2f342a3301fb9ec4f61e06 *tests/testthat/test_cdm_data.xlsx
8d05af0ec442ce6434a1d9edbf82a126 *tests/testthat/test_cdm_data_extra_pregnancy.xlsx
258aaeabc309cb4bd690a70662342d6f *tests/testthat/test_cdm_data_pregnancy.xlsx
906cd64f768d2b6df56296f41abc91b2 *tests/testthat/test_cdm_data_uppercase.xlsx
923d30559017f56c27f0e97d59aa82a2 *vignettes/gettingStarted.Rmd
c8707225e19d8458f7d9a0114c04f4a8 *vignettes/githubActions.Rmd
8e49fdb884108ccefbf191ad7fa30132 *vignettes/remoteDatabases.Rmd
