% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/data.R
\docType{data}
\name{screen_plate_layout}
\alias{screen_plate_layout}
\title{Example 96-well plate layout with well positions}
\format{
A data frame with one row per well and the following columns:
\describe{
\item{plateID}{Plate identifier such as \code{"EXP99_Gy0"} (character).}
\item{condition}{Experimental condition, \code{"Gy0"} or \code{"Gy2"}.}
\item{well}{Well identifier such as \code{"A1"} (character).}
\item{plate_rows}{Plate row letter, \code{"A"}-\code{"H"} (character).}
\item{plate_columns}{Plate column number, \code{1}-\code{12} (integer).}
\item{drug_name}{Drug identifier, or a control label (\code{"DMSO"},
\code{"kill_ctrl"}), or \code{NA} for empty buffer wells.}
\item{experiment_type}{Well role: \code{"sample"}, \code{"negative_ctrl"},
\code{"positive_ctrl"} or \code{"empty"} (evaporation-buffer ring).}
\item{concentration}{Drug concentration (micromolar), \code{NA} for controls
and empty wells.}
\item{normalized_cell_count}{Viability normalised to the negative control;
empty buffer wells hold no live cells and read near the kill control.}
}
}
\usage{
screen_plate_layout
}
\description{
A small, simulated 96-well plate (8 rows by 12 columns) assayed under two
conditions (\code{"Gy0"} and \code{"Gy2"}), in long (one row per well) format. The
layout follows good HTS practice: the outer ring (row A, row H, columns 1 and
12) is an empty evaporation buffer, the two flanking columns (2 and 11) carry
the positive (kill) and negative (DMSO) controls in a rotationally balanced
diagonal pattern, and the interior block (rows B-G, columns 3-10) holds an
8-point dose series of one drug per row. It is used to demonstrate the
plate-layout heatmap \code{\link[=plot_plate_heatmap]{plot_plate_heatmap()}}.
}
\details{
The data are simulated (see \code{data-raw/make_datasets.R}) and do not
correspond to any real compound or cell line.
}
\seealso{
\code{\link[=plot_plate_heatmap]{plot_plate_heatmap()}}
}
\keyword{datasets}
