CRAN Package Check Results for Package dlookr

Last updated on 2026-03-17 08:52:18 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.6.5 28.07 315.93 344.00 OK
r-devel-linux-x86_64-debian-gcc 0.6.5 18.89 187.89 206.78 ERROR
r-devel-linux-x86_64-fedora-clang 0.6.5 50.00 507.19 557.19 OK
r-devel-linux-x86_64-fedora-gcc 0.6.5 53.00 587.38 640.38 OK
r-devel-macos-arm64 0.6.5 7.00 101.00 108.00 OK
r-devel-windows-x86_64 0.6.5 40.00 350.00 390.00 OK
r-patched-linux-x86_64 0.6.5 30.56 302.52 333.08 OK
r-release-linux-x86_64 0.6.5 23.77 300.82 324.59 OK
r-release-macos-arm64 0.6.5 OK
r-release-macos-x86_64 0.6.5 20.00 282.00 302.00 OK
r-release-windows-x86_64 0.6.5 41.00 344.00 385.00 OK
r-oldrel-macos-arm64 0.6.5 OK
r-oldrel-macos-x86_64 0.6.5 20.00 260.00 280.00 OK
r-oldrel-windows-x86_64 0.6.5 58.00 456.00 514.00 OK

Check Details

Version: 0.6.5
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘EDA.Rmd’ using rmarkdown *** caught segfault *** address (nil), cause 'memory not mapped' Traceback: 1: grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, resolveHJust(x$just, x$hjust), resolveVJust(x$just, x$vjust), x$rot, x$check.overlap) 2: drawDetails.text(x, recording = FALSE) 3: drawDetails(x, recording = FALSE) 4: drawGrob(x) 5: recordGraphics(drawGrob(x), list(x = x), getNamespace("grid")) 6: grid.draw.grob(x$children[[i]], recording = FALSE) 7: grid.draw(x$children[[i]], recording = FALSE) 8: drawGTree(x) 9: recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 10: grid.draw.gTree(x$children[[i]], recording = FALSE) 11: grid.draw(x$children[[i]], recording = FALSE) 12: drawGTree(x) 13: recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 14: grid.draw.gTree(g) 15: grid.draw(g) 16: gridExtra::grid.arrange(top_left, top_right, bottom_left, bottom_right, ncol = 2, nrow = 2, top = top) 17: withCallingHandlers(expr, warning = function(w) if (inherits(w, classes)) tryInvokeRestart("muffleWarning")) 18: suppressWarnings(gridExtra::grid.arrange(top_left, top_right, bottom_left, bottom_right, ncol = 2, nrow = 2, top = top)) 19: plot_normality_raw(x, left, right, main, col, typographic, base_family) 20: plot_normality(df, x, left, right, col, typographic, base_family) 21: FUN(X[[i]], ...) 22: lapply(vars[idx_numeric], function(x) plot_normality(df, x, left, right, col, typographic, base_family)) 23: plot_normality_impl(.data, vars, left, right, col, typographic, base_family) 24: plot_normality.data.frame(carseats, Sales, CompPrice) 25: plot_normality(carseats, Sales, CompPrice) 26: eval(expr, envir) 27: eval(expr, envir) 28: withVisible(eval(expr, envir)) 29: withCallingHandlers(code, error = function (e) rlang::entrace(e), message = function (cnd) { watcher$capture_plot_and_output() if (on_message$capture) { watcher$push(cnd) } if (on_message$silence) { invokeRestart("muffleMessage") }}, warning = function (cnd) { if (getOption("warn") >= 2 || getOption("warn") < 0) { return() } watcher$capture_plot_and_output() if (on_warning$capture) { cnd <- sanitize_call(cnd) watcher$push(cnd) } if (on_warning$silence) { invokeRestart("muffleWarning") }}, error = function (cnd) { watcher$capture_plot_and_output() cnd <- sanitize_call(cnd) watcher$push(cnd) switch(on_error, continue = invokeRestart("eval_continue"), stop = invokeRestart("eval_stop"), error = NULL)}) 30: eval(call) 31: eval(call) 32: with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers) 33: doWithOneRestart(return(expr), restart) 34: withOneRestart(expr, restarts[[1L]]) 35: withRestartList(expr, restarts[-nr]) 36: doWithOneRestart(return(expr), restart) 37: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]]) 38: withRestartList(expr, restarts) 39: withRestarts(with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE) 40: evaluate::evaluate(...) 41: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)) 42: in_dir(input_dir(), expr) 43: in_input_dir(evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))) 44: eng_r(options) 45: block_exec(params) 46: call_block(x) 47: process_group(group) 48: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }) 49: with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())) 50: xfun:::handle_error(with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc) 51: process_file(text, output) 52: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet) 53: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(), output_dir = getwd(), ...) 54: vweave_rmarkdown(...) 55: engine$weave(file, quiet = quiet, encoding = enc) 56: doTryCatch(return(expr), name, parentenv, handler) 57: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 58: tryCatchList(expr, classes, parentenv, handlers) 59: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))}) 60: tools:::.buildOneVignette("EDA.Rmd", "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/dlookr.Rcheck/vign_test/dlookr", TRUE, FALSE, "EDA", "UTF-8", "/tmp/RtmpLczTHd/file28b4d13b10f955.rds") An irrecoverable exception occurred. R is aborting now ... Segmentation fault --- re-building ‘diagonosis.Rmd’ using rmarkdown *** caught segfault *** address (nil), cause 'memory not mapped' Traceback: 1: grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, resolveHJust(x$just, x$hjust), resolveVJust(x$just, x$vjust), x$rot, x$check.overlap) 2: drawDetails.text(x, recording = FALSE) 3: drawDetails(x, recording = FALSE) 4: drawGrob(x) 5: recordGraphics(drawGrob(x), list(x = x), getNamespace("grid")) 6: grid.draw.grob(x$children[[i]], recording = FALSE) 7: grid.draw(x$children[[i]], recording = FALSE) 8: drawGTree(x) 9: recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 10: grid.draw.gTree(x$children[[i]], recording = FALSE) 11: grid.draw(x$children[[i]], recording = FALSE) 12: drawGTree(x) 13: recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 14: grid.draw.gTree(g) 15: grid.draw(g) 16: gridExtra::grid.arrange(top_left, top_right, bottom_left, bottom_right, ncol = 2, nrow = 2, widths = c(2, 3), top = top) 17: withCallingHandlers(expr, warning = function(w) if (inherits(w, classes)) tryInvokeRestart("muffleWarning")) 18: suppressWarnings(gridExtra::grid.arrange(top_left, top_right, bottom_left, bottom_right, ncol = 2, nrow = 2, widths = c(2, 3), top = top)) 19: plot_outlier_raw(x, main, col, typographic, base_family) 20: plot_outliers(df, x, col, typographic, base_family) 21: FUN(X[[i]], ...) 22: lapply(vars[idx_numeric][!idx_na], function(x) plot_outliers(df, x, col, typographic, base_family)) 23: plot_outlier_impl(.data, vars, col, typographic, base_family) 24: plot_outlier.data.frame(., arr_delay) 25: plot_outlier(., arr_delay) 26: flights %>% plot_outlier(arr_delay) 27: eval(expr, envir) 28: eval(expr, envir) 29: withVisible(eval(expr, envir)) 30: withCallingHandlers(code, error = function (e) rlang::entrace(e), message = function (cnd) { watcher$capture_plot_and_output() if (on_message$capture) { watcher$push(cnd) } if (on_message$silence) { invokeRestart("muffleMessage") }}, warning = function (cnd) { if (getOption("warn") >= 2 || getOption("warn") < 0) { return() } watcher$capture_plot_and_output() if (on_warning$capture) { cnd <- sanitize_call(cnd) watcher$push(cnd) } if (on_warning$silence) { invokeRestart("muffleWarning") }}, error = function (cnd) { watcher$capture_plot_and_output() cnd <- sanitize_call(cnd) watcher$push(cnd) switch(on_error, continue = invokeRestart("eval_continue"), stop = invokeRestart("eval_stop"), error = NULL)}) 31: eval(call) 32: eval(call) 33: with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers) 34: doWithOneRestart(return(expr), restart) 35: withOneRestart(expr, restarts[[1L]]) 36: withRestartList(expr, restarts[-nr]) 37: doWithOneRestart(return(expr), restart) 38: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]]) 39: withRestartList(expr, restarts) 40: withRestarts(with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE) 41: evaluate::evaluate(...) 42: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)) 43: in_dir(input_dir(), expr) 44: in_input_dir(evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))) 45: eng_r(options) 46: block_exec(params) 47: call_block(x) 48: process_group(group) 49: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }) 50: with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())) 51: xfun:::handle_error(with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc) 52: process_file(text, output) 53: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet) 54: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(), output_dir = getwd(), ...) 55: vweave_rmarkdown(...) 56: engine$weave(file, quiet = quiet, encoding = enc) 57: doTryCatch(return(expr), name, parentenv, handler) 58: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 59: tryCatchList(expr, classes, parentenv, handlers) 60: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))}) 61: tools:::.buildOneVignette("diagonosis.Rmd", "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/dlookr.Rcheck/vign_test/dlookr", TRUE, FALSE, "diagonosis", "UTF-8", "/tmp/RtmpLczTHd/file28b4d11b0679e1.rds") An irrecoverable exception occurred. R is aborting now ... Segmentation fault --- re-building ‘introduce.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘introduce.Rmd’ --- re-building ‘transformation.Rmd’ using rmarkdown *** caught segfault *** address (nil), cause 'memory not mapped' Traceback: 1: grid.Call.graphics(C_text, as.graphicsAnnot(x$label), x$x, x$y, resolveHJust(x$just, x$hjust), resolveVJust(x$just, x$vjust), x$rot, x$check.overlap) 2: drawDetails.text(x, recording = FALSE) 3: drawDetails(x, recording = FALSE) 4: drawGrob(x) 5: recordGraphics(drawGrob(x), list(x = x), getNamespace("grid")) 6: grid.draw.grob(x$children[[i]], recording = FALSE) 7: grid.draw(x$children[[i]], recording = FALSE) 8: drawGTree(x) 9: recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 10: grid.draw.gTree(x$children[[i]], recording = FALSE) 11: grid.draw(x$children[[i]], recording = FALSE) 12: drawGTree(x) 13: recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 14: grid.draw.gTree(x$children[[i]], recording = FALSE) 15: grid.draw(x$children[[i]], recording = FALSE) 16: drawGTree(x) 17: recordGraphics(drawGTree(x), list(x = x), getNamespace("grid")) 18: grid.draw.gTree(gtable) 19: grid.draw(gtable) 20: `print.ggplot2::ggplot`(x) 21: print(x) 22: normal_print(x) 23: knit_print.default(x, ...) 24: knit_print(x, ...) 25: withVisible(knit_print(x, ...)) 26: fun(x, options = options) 27: handler$value(value, visible) 28: handle_value(handler, value, visible, envir) 29: withVisible(handle_value(handler, value, visible, envir)) 30: watcher$print_value(ev$value, ev$visible, envir) 31: withCallingHandlers(code, error = function (e) rlang::entrace(e), message = function (cnd) { watcher$capture_plot_and_output() if (on_message$capture) { watcher$push(cnd) } if (on_message$silence) { invokeRestart("muffleMessage") }}, warning = function (cnd) { if (getOption("warn") >= 2 || getOption("warn") < 0) { return() } watcher$capture_plot_and_output() if (on_warning$capture) { cnd <- sanitize_call(cnd) watcher$push(cnd) } if (on_warning$silence) { invokeRestart("muffleWarning") }}, error = function (cnd) { watcher$capture_plot_and_output() cnd <- sanitize_call(cnd) watcher$push(cnd) switch(on_error, continue = invokeRestart("eval_continue"), stop = invokeRestart("eval_stop"), error = NULL)}) 32: eval(call) 33: eval(call) 34: with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers) 35: doWithOneRestart(return(expr), restart) 36: withOneRestart(expr, restarts[[1L]]) 37: withRestartList(expr, restarts[-nr]) 38: doWithOneRestart(return(expr), restart) 39: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]]) 40: withRestartList(expr, restarts) 41: withRestarts(with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE) 42: evaluate::evaluate(...) 43: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)) 44: in_dir(input_dir(), expr) 45: in_input_dir(evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))) 46: eng_r(options) 47: block_exec(params) 48: call_block(x) 49: process_group(group) 50: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }) 51: with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())) 52: xfun:::handle_error(with_options(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (is_R_CMD_build() || is_R_CMD_check()) error <<- format(e) }), list(rlang_trace_top_env = knit_global())), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc) 53: process_file(text, output) 54: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet) 55: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(), output_dir = getwd(), ...) 56: vweave_rmarkdown(...) 57: engine$weave(file, quiet = quiet, encoding = enc) 58: doTryCatch(return(expr), name, parentenv, handler) 59: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 60: tryCatchList(expr, classes, parentenv, handlers) 61: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))}) 62: tools:::.buildOneVignette("transformation.Rmd", "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/dlookr.Rcheck/vign_test/dlookr", TRUE, FALSE, "transformation", "UTF-8", "/tmp/RtmpLczTHd/file28b4d17c9b0632.rds") An irrecoverable exception occurred. R is aborting now ... Segmentation fault SUMMARY: processing the following files failed: ‘EDA.Rmd’ ‘diagonosis.Rmd’ ‘transformation.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc