Last updated on 2026-02-02 09:51:25 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| plinkQC | 1 | 1 | 11 |
Current CRAN status: ERROR: 1, NOTE: 1, OK: 11
Version: 1.0.0
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Hannah Meyer <hannah.v.meyer@gmail.com>’
Found the following (possibly) invalid file URIs:
URI: Genomes1000.html
From: inst/doc/HapMap.pdf
URI: HapMap.html
From: inst/doc/plinkQC.pdf
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘AncestryCheck.Rmd’ using rmarkdown
Could not fetch http://www.zotero.org/styles/plos
HttpExceptionRequest Request {
host = "www.zotero.org"
port = 80
secure = False
requestHeaders = []
path = "/styles/plos"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
ResponseTimeout
Error: processing vignette 'AncestryCheck.Rmd' failed with diagnostics:
pandoc document conversion failed with error 61
--- failed re-building ‘AncestryCheck.Rmd’
--- re-building ‘Genomes1000.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘Genomes1000.Rmd’
--- re-building ‘HapMap.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘HapMap.Rmd’
--- re-building ‘my-vignette.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘my-vignette.Rmd’
--- re-building ‘plinkQC.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘plinkQC.Rmd’
SUMMARY: processing the following file failed:
‘AncestryCheck.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc