CRAN Package Check Results for Maintainer ‘Juan Alberto Molina-Valero <jamolinavalero at gmail.com>’

Last updated on 2026-02-01 09:51:25 CET.

Package ERROR NOTE OK
FORTLS 7 2 4

Package FORTLS

Current CRAN status: ERROR: 7, NOTE: 2, OK: 4

Additional issues

donttest

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘plot_design_optimization.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘plot_design_optimization.Rmd’ --- re-building ‘stand_level.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘stand_level.Rmd’ --- re-building ‘tree_level.Rmd’ using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building ‘tree_level.Rmd’ SUMMARY: processing the following file failed: ‘tree_level.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘plot_design_optimization.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘plot_design_optimization.Rmd’ --- re-building ‘stand_level.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘stand_level.Rmd’ --- re-building ‘tree_level.Rmd’ using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building ‘tree_level.Rmd’ SUMMARY: processing the following file failed: ‘tree_level.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘plot_design_optimization.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /data/gannet/ripley/R/packages/tests-clang/FORTLS.Rcheck/FORTLS/data (probably via setwd()). It will be restored to /data/gannet/ripley/R/packages/tests-clang/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘plot_design_optimization.Rmd’ --- re-building ‘stand_level.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /data/gannet/ripley/R/packages/tests-clang/FORTLS.Rcheck/FORTLS/data (probably via setwd()). It will be restored to /data/gannet/ripley/R/packages/tests-clang/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘stand_level.Rmd’ --- re-building ‘tree_level.Rmd’ using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building ‘tree_level.Rmd’ SUMMARY: processing the following file failed: ‘tree_level.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘plot_design_optimization.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /data/gannet/ripley/R/packages/tests-devel/FORTLS.Rcheck/FORTLS/data (probably via setwd()). It will be restored to /data/gannet/ripley/R/packages/tests-devel/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘plot_design_optimization.Rmd’ --- re-building ‘stand_level.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /data/gannet/ripley/R/packages/tests-devel/FORTLS.Rcheck/FORTLS/data (probably via setwd()). It will be restored to /data/gannet/ripley/R/packages/tests-devel/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘stand_level.Rmd’ --- re-building ‘tree_level.Rmd’ using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building ‘tree_level.Rmd’ SUMMARY: processing the following file failed: ‘tree_level.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘plot_design_optimization.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘plot_design_optimization.Rmd’ --- re-building ‘stand_level.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘stand_level.Rmd’ --- re-building ‘tree_level.Rmd’ using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building ‘tree_level.Rmd’ SUMMARY: processing the following file failed: ‘tree_level.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-patched-linux-x86_64

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘plot_design_optimization.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘plot_design_optimization.Rmd’ --- re-building ‘stand_level.Rmd’ using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘stand_level.Rmd’ --- re-building ‘tree_level.Rmd’ using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building ‘tree_level.Rmd’ SUMMARY: processing the following file failed: ‘tree_level.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-linux-x86_64

Version: 1.6.2
Check: installed package size
Result: NOTE installed size is 9.0Mb sub-directories of 1Mb or more: data 2.7Mb doc 1.2Mb libs 4.3Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'plot_design_optimization.Rmd' using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to D:/temp/2026_01_31_01_50_01_651/RtmpScWGnS/RLIBS_247846777066/FORTLS/data (probably via setwd()). It will be restored to D:/RCompile/CRANpkg/local/4.4/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit --- finished re-building 'plot_design_optimization.Rmd' --- re-building 'stand_level.Rmd' using rmarkdown Warning in in_dir(input_dir(), expr) : You changed the working directory to D:/temp/2026_01_31_01_50_01_651/RtmpScWGnS/RLIBS_247846777066/FORTLS/data (probably via setwd()). It will be restored to D:/RCompile/CRANpkg/local/4.4/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit --- finished re-building 'stand_level.Rmd' --- re-building 'tree_level.Rmd' using rmarkdown trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1' Content type 'application/binary' length 61527072 bytes (58.7 MB) ================================================== downloaded 58.7 MB trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1' Content type 'application/binary' length 12898220 bytes (12.3 MB) ================================================== downloaded 12.3 MB Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `vroom::vroom_write()`: ! unused argument (path = file.path(dir.result, .data.red$file[1])) --- Backtrace: ▆ 1. └─FORTLS::normalize(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tree_level.Rmd' failed with diagnostics: unused argument (path = file.path(dir.result, .data.red$file[1])) --- failed re-building 'tree_level.Rmd' SUMMARY: processing the following file failed: 'tree_level.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-windows-x86_64