Last updated on 2026-02-01 09:51:25 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| FORTLS | 7 | 2 | 4 |
Current CRAN status: ERROR: 7, NOTE: 2, OK: 4
Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘plot_design_optimization.Rmd’ using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘plot_design_optimization.Rmd’
--- re-building ‘stand_level.Rmd’ using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘stand_level.Rmd’
--- re-building ‘tree_level.Rmd’ using rmarkdown
trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1'
Content type 'application/binary' length 61527072 bytes (58.7 MB)
==================================================
downloaded 58.7 MB
trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1'
Content type 'application/binary' length 12898220 bytes (12.3 MB)
==================================================
downloaded 12.3 MB
Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `vroom::vroom_write()`:
! unused argument (path = file.path(dir.result, .data.red$file[1]))
---
Backtrace:
▆
1. └─FORTLS::normalize(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'tree_level.Rmd' failed with diagnostics:
unused argument (path = file.path(dir.result, .data.red$file[1]))
--- failed re-building ‘tree_level.Rmd’
SUMMARY: processing the following file failed:
‘tree_level.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘plot_design_optimization.Rmd’ using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘plot_design_optimization.Rmd’
--- re-building ‘stand_level.Rmd’ using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘stand_level.Rmd’
--- re-building ‘tree_level.Rmd’ using rmarkdown
trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1'
Content type 'application/binary' length 61527072 bytes (58.7 MB)
==================================================
downloaded 58.7 MB
trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1'
Content type 'application/binary' length 12898220 bytes (12.3 MB)
==================================================
downloaded 12.3 MB
Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `vroom::vroom_write()`:
! unused argument (path = file.path(dir.result, .data.red$file[1]))
---
Backtrace:
▆
1. └─FORTLS::normalize(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'tree_level.Rmd' failed with diagnostics:
unused argument (path = file.path(dir.result, .data.red$file[1]))
--- failed re-building ‘tree_level.Rmd’
SUMMARY: processing the following file failed:
‘tree_level.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘plot_design_optimization.Rmd’ using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to /data/gannet/ripley/R/packages/tests-clang/FORTLS.Rcheck/FORTLS/data (probably via setwd()). It will be restored to /data/gannet/ripley/R/packages/tests-clang/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘plot_design_optimization.Rmd’
--- re-building ‘stand_level.Rmd’ using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to /data/gannet/ripley/R/packages/tests-clang/FORTLS.Rcheck/FORTLS/data (probably via setwd()). It will be restored to /data/gannet/ripley/R/packages/tests-clang/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘stand_level.Rmd’
--- re-building ‘tree_level.Rmd’ using rmarkdown
trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1'
Content type 'application/binary' length 61527072 bytes (58.7 MB)
==================================================
downloaded 58.7 MB
trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1'
Content type 'application/binary' length 12898220 bytes (12.3 MB)
==================================================
downloaded 12.3 MB
Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `vroom::vroom_write()`:
! unused argument (path = file.path(dir.result, .data.red$file[1]))
---
Backtrace:
▆
1. └─FORTLS::normalize(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'tree_level.Rmd' failed with diagnostics:
unused argument (path = file.path(dir.result, .data.red$file[1]))
--- failed re-building ‘tree_level.Rmd’
SUMMARY: processing the following file failed:
‘tree_level.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘plot_design_optimization.Rmd’ using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to /data/gannet/ripley/R/packages/tests-devel/FORTLS.Rcheck/FORTLS/data (probably via setwd()). It will be restored to /data/gannet/ripley/R/packages/tests-devel/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘plot_design_optimization.Rmd’
--- re-building ‘stand_level.Rmd’ using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to /data/gannet/ripley/R/packages/tests-devel/FORTLS.Rcheck/FORTLS/data (probably via setwd()). It will be restored to /data/gannet/ripley/R/packages/tests-devel/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘stand_level.Rmd’
--- re-building ‘tree_level.Rmd’ using rmarkdown
trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1'
Content type 'application/binary' length 61527072 bytes (58.7 MB)
==================================================
downloaded 58.7 MB
trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1'
Content type 'application/binary' length 12898220 bytes (12.3 MB)
==================================================
downloaded 12.3 MB
Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `vroom::vroom_write()`:
! unused argument (path = file.path(dir.result, .data.red$file[1]))
---
Backtrace:
▆
1. └─FORTLS::normalize(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'tree_level.Rmd' failed with diagnostics:
unused argument (path = file.path(dir.result, .data.red$file[1]))
--- failed re-building ‘tree_level.Rmd’
SUMMARY: processing the following file failed:
‘tree_level.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘plot_design_optimization.Rmd’ using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘plot_design_optimization.Rmd’
--- re-building ‘stand_level.Rmd’ using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘stand_level.Rmd’
--- re-building ‘tree_level.Rmd’ using rmarkdown
trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1'
Content type 'application/binary' length 61527072 bytes (58.7 MB)
==================================================
downloaded 58.7 MB
trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1'
Content type 'application/binary' length 12898220 bytes (12.3 MB)
==================================================
downloaded 12.3 MB
Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `vroom::vroom_write()`:
! unused argument (path = file.path(dir.result, .data.red$file[1]))
---
Backtrace:
▆
1. └─FORTLS::normalize(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'tree_level.Rmd' failed with diagnostics:
unused argument (path = file.path(dir.result, .data.red$file[1]))
--- failed re-building ‘tree_level.Rmd’
SUMMARY: processing the following file failed:
‘tree_level.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘plot_design_optimization.Rmd’ using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘plot_design_optimization.Rmd’
--- re-building ‘stand_level.Rmd’ using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/FORTLS/data (probably via setwd()). It will be restored to /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘stand_level.Rmd’
--- re-building ‘tree_level.Rmd’ using rmarkdown
trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1'
Content type 'application/binary' length 61527072 bytes (58.7 MB)
==================================================
downloaded 58.7 MB
trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1'
Content type 'application/binary' length 12898220 bytes (12.3 MB)
==================================================
downloaded 12.3 MB
Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `vroom::vroom_write()`:
! unused argument (path = file.path(dir.result, .data.red$file[1]))
---
Backtrace:
▆
1. └─FORTLS::normalize(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'tree_level.Rmd' failed with diagnostics:
unused argument (path = file.path(dir.result, .data.red$file[1]))
--- failed re-building ‘tree_level.Rmd’
SUMMARY: processing the following file failed:
‘tree_level.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-linux-x86_64
Version: 1.6.2
Check: installed package size
Result: NOTE
installed size is 9.0Mb
sub-directories of 1Mb or more:
data 2.7Mb
doc 1.2Mb
libs 4.3Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.6.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'plot_design_optimization.Rmd' using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to D:/temp/2026_01_31_01_50_01_651/RtmpScWGnS/RLIBS_247846777066/FORTLS/data (probably via setwd()). It will be restored to D:/RCompile/CRANpkg/local/4.4/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
--- finished re-building 'plot_design_optimization.Rmd'
--- re-building 'stand_level.Rmd' using rmarkdown
Warning in in_dir(input_dir(), expr) :
You changed the working directory to D:/temp/2026_01_31_01_50_01_651/RtmpScWGnS/RLIBS_247846777066/FORTLS/data (probably via setwd()). It will be restored to D:/RCompile/CRANpkg/local/4.4/FORTLS.Rcheck/vign_test/FORTLS/vignettes. See the Note section in ?knitr::knit
--- finished re-building 'stand_level.Rmd'
--- re-building 'tree_level.Rmd' using rmarkdown
trying URL 'https://www.dropbox.com/s/17yl25pbrapat52/PinusRadiata.laz?dl=1'
Content type 'application/binary' length 61527072 bytes (58.7 MB)
==================================================
downloaded 58.7 MB
trying URL 'https://www.dropbox.com/scl/fi/es5pfj87wj0g6y8414dpo/PiceaAbies.laz?rlkey=ayt21mbndc6i6fyiz2e7z6oap&dl=1'
Content type 'application/binary' length 12898220 bytes (12.3 MB)
==================================================
downloaded 12.3 MB
Quitting from tree_level.Rmd:54-61 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `vroom::vroom_write()`:
! unused argument (path = file.path(dir.result, .data.red$file[1]))
---
Backtrace:
▆
1. └─FORTLS::normalize(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'tree_level.Rmd' failed with diagnostics:
unused argument (path = file.path(dir.result, .data.red$file[1]))
--- failed re-building 'tree_level.Rmd'
SUMMARY: processing the following file failed:
'tree_level.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-windows-x86_64