Last updated on 2026-07-21 09:53:39 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.10.0 | 5.88 | 142.77 | 148.65 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.10.0 | 4.40 | 97.66 | 102.06 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.10.0 | 10.00 | 223.42 | 233.42 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.10.0 | 104.38 | OK | |||
| r-devel-windows-x86_64 | 2.10.0 | 10.00 | 140.00 | 150.00 | OK | |
| r-patched-linux-x86_64 | 2.10.0 | 8.11 | 132.98 | 141.09 | OK | |
| r-release-linux-x86_64 | 2.10.0 | 6.54 | 134.06 | 140.60 | OK | |
| r-release-macos-arm64 | 2.10.0 | 2.00 | 33.00 | 35.00 | OK | |
| r-release-macos-x86_64 | 2.10.0 | 5.00 | 165.00 | 170.00 | OK | |
| r-release-windows-x86_64 | 2.10.0 | 11.00 | 147.00 | 158.00 | OK | |
| r-oldrel-macos-arm64 | 2.10.0 | 1.00 | 37.00 | 38.00 | ERROR | |
| r-oldrel-macos-x86_64 | 2.10.0 | 5.00 | 133.00 | 138.00 | OK | |
| r-oldrel-windows-x86_64 | 2.10.0 | 13.00 | 178.00 | 191.00 | OK |
Version: 2.10.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [13s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(loo)
This is loo version 2.10.0
- Online documentation and vignettes at mc-stan.org/loo
- As of v2.0.0 loo defaults to 1 core but we recommend using as many as possible. Use the 'cores' argument or set options(mc.cores = NUM_CORES) for an entire session.
> library(testthat)
Attaching package: 'testthat'
The following object is masked from 'package:loo':
compare
> Sys.setenv("R_TESTS" = "")
> test_check("loo")
Starting 2 test processes.
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: 1: outer(X, Y)outer(X, Y)
> test_loo_and_waic.R: 2: -theta %o% x
> test_loo_and_waic.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_and_waic.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R: 6: FUN(X[[i]], ...)
> test_loo_and_waic.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_and_waic.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 2: 9: -theta %o% x
> test_loo_and_waic.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R: 6: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) {FUN(X[[i]], ...)
> test_loo_and_waic.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_and_waic.R: if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]]) LONG <- 75L
> test_loo_and_waic.R: sm <- strsplit(conditionMessage(e), "\n")[[1L]]10: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")tryCatchList(expr, classes, parentenv, handlers) if (is.na(w))
> test_loo_and_waic.R: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], 11: type = "b")tryCatch(expr, error = function(e) { if (w > LONG) call <- conditionCall(e) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_and_waic.R: 12: prefix <- paste("Error in", dcall, ": ")try(lapply(X = S, FUN = FUN, ...), silent = TRUE) LONG <- 75L
> test_loo_and_waic.R: sm <- strsplit(conditionMessage(e), "\n")[[1L]]13: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ")
> test_loo_and_waic.R: }14: else prefix <- "Error : "FUN(X[[i]], ...) msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)
> test_loo_and_waic.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_and_waic.R: 16: .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_and_waic.R: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: 12: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, try(lapply(X = S, FUN = FUN, ...), silent = TRUE) method = method)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 13: 18: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores,
> test_loo_and_waic.R: method = is_method)14:
> test_loo_and_waic.R: FUN(X[[i]], ...)19:
> test_loo_and_waic.R: loo.array(LLarr, r_eff = r_eff_arr, cores = 2)15:
> test_loo_and_waic.R: lapply(seq_len(cores), inner.do)20:
> test_loo_and_waic.R: loo(LLarr, r_eff = r_eff_arr, cores = 2)16:
> test_loo_and_waic.R: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, 21: method = method)withCallingHandlers(expr, warning = function(w) if (inherits(w,
> test_loo_and_waic.R: classes)) tryInvokeRestart("muffleWarning"))18:
> test_loo_and_waic.R: importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, 22: method = is_method)suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))
> test_loo_and_waic.R:
> test_loo_and_waic.R: 19: 23: loo.array(LLarr, r_eff = r_eff_arr, cores = 2)eval(code, test_env)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 20: 24: loo(LLarr, r_eff = r_eff_arr, cores = 2)eval(code, test_env)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 21: 25: withCallingHandlers(expr, warning = function(w) if (inherits(w, withCallingHandlers({ classes)) tryInvokeRestart("muffleWarning")) eval(code, test_env)
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations22: if (snapshot_skipped) {suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) skip("On CRAN")
> test_loo_and_waic.R: }23: else if (!new_expectations && skip_on_empty) {eval(code, test_env) skip_empty()
> test_loo_and_waic.R: }24: }, expectation = handle_expectation, packageNotFoundError = function(e) {eval(code, test_env) if (on_cran()) {
> test_loo_and_waic.R: skip(paste0("{", e$package, "} is not installed."))25: }withCallingHandlers({}, snapshot_on_cran = function(cnd) {
> test_loo_and_waic.R: eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, invokeRestart("muffle_cran_snapshot") error = handle_error, interrupt = handle_interrupt)}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 26: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 27: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 28:
> test_loo_and_waic.R: tryCatchList(expr, classes, parentenv, handlers)26: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 27: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R:
> test_loo_and_waic.R: 28: 29: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))tryCatchList(expr, classes, parentenv, handlers) }
> test_loo_and_waic.R: 29: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 30: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 30: 31: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 32: withRestarts(tryCatch(withCallingHandlers({doWithOneRestart(return(expr), restart) eval(code, test_env)
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations31: if (snapshot_skipped) {withOneRestart(expr, restarts[[1L]]) skip("On CRAN")
> test_loo_and_waic.R: }32: else if (!new_expectations && skip_on_empty) {withRestarts(tryCatch(withCallingHandlers({ skip_empty() eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations}, expectation = handle_expectation, packageNotFoundError = function(e) { if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() if (on_cran()) { } skip(paste0("{", e$package, "} is not installed."))}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) {}, snapshot_on_cran = function(cnd) { skip(paste0("{", e$package, "} is not installed.")) snapshot_skipped <<- TRUE } invokeRestart("muffle_cran_snapshot")}, snapshot_on_cran = function(cnd) {}, skip = handle_skip, warning = handle_warning, message = handle_message, snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { error = handle_error, interrupt = handle_interrupt), error = handle_fatal), })
> test_loo_and_waic.R: 33: test_code(code, parent.frame())
> test_loo_and_waic.R: end_test = function() {34: })test_that("loo with cores=1 and cores=2 gives same results",
> test_loo_and_waic.R: {33: loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, test_code(code, parent.frame()) cores = 2)) expect_equal(loo1$estimates, loo2$estimates) })
> test_loo_and_waic.R: 35:
> test_loo_and_waic.R: eval(code, test_env)34:
> test_loo_and_waic.R: test_that("loo with cores=1 and cores=2 gives same results", 36: {eval(code, test_env) loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr,
> test_loo_and_waic.R: cores = 2))37: expect_equal(loo1$estimates, loo2$estimates) })
> test_loo_and_waic.R: 35: eval(code, test_env)withCallingHandlers({
> test_loo_and_waic.R: eval(code, test_env)36: new_expectations <- the$test_expectations > starting_expectationseval(code, test_env) if (snapshot_skipped) {
> test_loo_and_waic.R: skip("On CRAN")37: }withCallingHandlers({ else if (!new_expectations && skip_on_empty) { eval(code, test_env) skip_empty() new_expectations <- the$test_expectations > starting_expectations } if (snapshot_skipped) {}, expectation = handle_expectation, packageNotFoundError = function(e) { skip("On CRAN") if (on_cran()) { } skip(paste0("{", e$package, "} is not installed.")) else if (!new_expectations && skip_on_empty) { }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) error = handle_error, interrupt = handle_interrupt) }
> test_loo_and_waic.R: 38: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 39: }, snapshot_on_cran = function(cnd) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) snapshot_skipped <<- TRUE
> test_loo_and_waic.R: invokeRestart("muffle_cran_snapshot")40: }, skip = handle_skip, warning = handle_warning, message = handle_message, tryCatchList(expr, classes, parentenv, handlers) error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 41: 38: tryCatch(withCallingHandlers({doTryCatch(return(expr), name, parentenv, handler) eval(code, test_env)
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations39: if (snapshot_skipped) { skip("On CRAN") }tryCatchOne(expr, names, parentenv, handlers[[1L]]) else if (!new_expectations && skip_on_empty) {
> test_loo_and_waic.R: skip_empty()40: }tryCatchList(expr, classes, parentenv, handlers)}, expectation = handle_expectation, packageNotFoundError = function(e) {
> test_loo_and_waic.R: if (on_cran()) {41: skip(paste0("{", e$package, "} is not installed."))tryCatch(withCallingHandlers({ } eval(code, test_env)}, snapshot_on_cran = function(cnd) { new_expectations <- the$test_expectations > starting_expectations snapshot_skipped <<- TRUE if (snapshot_skipped) { invokeRestart("muffle_cran_snapshot") skip("On CRAN")}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt), error = handle_fatal) else if (!new_expectations && skip_on_empty) {
> test_loo_and_waic.R: skip_empty()42: }doWithOneRestart(return(expr), restart)}, expectation = handle_expectation, packageNotFoundError = function(e) {
> test_loo_and_waic.R: if (on_cran()) {43: skip(paste0("{", e$package, "} is not installed."))withOneRestart(expr, restarts[[1L]]) }
> test_loo_and_waic.R: }, snapshot_on_cran = function(cnd) {44: snapshot_skipped <<- TRUEwithRestarts(tryCatch(withCallingHandlers({ invokeRestart("muffle_cran_snapshot") eval(code, test_env)}, skip = handle_skip, warning = handle_warning, message = handle_message, new_expectations <- the$test_expectations > starting_expectations error = handle_error, interrupt = handle_interrupt), error = handle_fatal) if (snapshot_skipped) {
> test_loo_and_waic.R: skip("On CRAN")42: }doWithOneRestart(return(expr), restart) else if (!new_expectations && skip_on_empty) {
> test_loo_and_waic.R: skip_empty()43: }withOneRestart(expr, restarts[[1L]])}, expectation = handle_expectation, packageNotFoundError = function(e) {
> test_loo_and_waic.R: if (on_cran()) {44: skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {withRestarts(tryCatch(withCallingHandlers({ snapshot_skipped <<- TRUE eval(code, test_env) invokeRestart("muffle_cran_snapshot") new_expectations <- the$test_expectations > starting_expectations}, skip = handle_skip, warning = handle_warning, message = handle_message, if (snapshot_skipped) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal), skip("On CRAN") end_test = function() { } }) else if (!new_expectations && skip_on_empty) {
> test_loo_and_waic.R: skip_empty()45: }test_code(code = exprs, env = env, reporter = get_reporter() %||% }, expectation = handle_expectation, packageNotFoundError = function(e) { StopReporter$new()) if (on_cran()) {
> test_loo_and_waic.R: skip(paste0("{", e$package, "} is not installed."))46: }source_file(path, env = env(env), desc = desc, shuffle = shuffle, }, snapshot_on_cran = function(cnd) { error_call = error_call) snapshot_skipped <<- TRUE
> test_loo_and_waic.R: invokeRestart("muffle_cran_snapshot")47: }, skip = handle_skip, warning = handle_warning, message = handle_message, test_one_file(path, env = the$testing_env, shuffle = shuffle) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
> test_loo_and_waic.R: end_test = function() {48: })doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 49: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 50: 45: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_and_waic.R: 46: tryCatchList(expr, classes, parentenv, handlers)source_file(path, env = env(env), desc = desc, shuffle = shuffle,
> test_loo_and_waic.R: error_call = error_call)51:
> test_loo_and_waic.R: tryCatch(code, testthat_abort_reporter = function(cnd) {47: cat(conditionMessage(cnd), "\n") NULL})
> test_loo_and_waic.R: 52: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_and_waic.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_and_waic.R: 53: asNamespace("testthat")$queue_task(path, shuffle)49: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 54: 51: (function (path, shuffle) tryCatch(code, testthat_abort_reporter = function(cnd) {{ cat(conditionMessage(cnd), "\n") asNamespace("testthat")$queue_task(path, shuffle) NULL})(base::quote("test_loo_and_waic.R"), base::quote(FALSE))})
> test_loo_and_waic.R:
> test_loo_and_waic.R: 55: 52: (function (what, args, quote = FALSE, envir = parent.frame()) with_reporter(multi, test_one_file(path, env = the$testing_env, { shuffle = shuffle)) if (!is.list(args))
> test_loo_and_waic.R: stop("second argument must be a list")53: if (quote) asNamespace("testthat")$queue_task(path, shuffle) args <- lapply(args, enquote)
> test_loo_and_waic.R: .Internal(do.call(what, args, envir))54: })(base::quote(function (path, shuffle) (function (path, shuffle) {{ asNamespace("testthat")$queue_task(path, shuffle) asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_and_waic.R"), base::quote(FALSE))
> test_loo_and_waic.R: 55: (function (what, args, quote = FALSE, envir = parent.frame()) }), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155605190f1ce"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 57: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155605190f1ce"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", compress = FALSE)
> test_loo_and_waic.R: 58: base::withCallingHandlers({ {{ NULL if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir)) NULL})(base::quote(function (path, shuffle) }{ base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155605190f1ce"), asNamespace("testthat")$queue_task(path, shuffle) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, }), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155605190f1ce"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 57: quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155605190f1ce"), compress = FALSE) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, base::flush(base::stdout()) quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", base::flush(base::stderr()) compress = FALSE) {
> test_loo_and_waic.R: NULL58: NULLbase::withCallingHandlers({
> test_loo_and_waic.R: } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155605190f1ce"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", compress = FALSE) class(e2) <- base::c("callr_remote_error", class(e2)) base::flush(base::stdout()) e2 <- err$add_trace_back(e2) base::flush(base::stderr()) cut <- base::which(e2$trace$scope == "global")[1] { if (!base::is.na(cut)) { NULL e2$trace <- e2$trace[-(1:cut), ] NULL } } if (callr_data$has_otel) { base::invisible() callr_data$otel_span$record_exception(e2)}, error = function(e) { } { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", callr_data <- base::as.environment("tools:callr")$`__callr_data__` ".error")) err <- callr_data$err } if (FALSE) {}, interrupt = function(e) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) { utils::dump.frames("__callr_dump__") callr_data <- base::as.environment("tools:callr")$`__callr_data__` base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, err <- callr_data$err envir = callr_data) if (FALSE) { base::rm("__callr_dump__", envir = .GlobalEnv) base::assign(".Traceback", base::.traceback(4), envir = callr_data) } utils::dump.frames("__callr_dump__") e <- err$process_call(e) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, e2 <- err$new_error("error in callr subprocess") envir = callr_data) class <- base::class base::rm("__callr_dump__", envir = .GlobalEnv) class(e2) <- base::c("callr_remote_error", class(e2)) } e2 <- err$add_trace_back(e2) e <- err$process_call(e) cut <- base::which(e2$trace$scope == "global")[1] e2 <- err$new_error("error in callr subprocess") if (!base::is.na(cut)) { class <- base::class e2$trace <- e2$trace[-(1:cut), ] class(e2) <- base::c("callr_remote_error", class(e2)) } e2 <- err$add_trace_back(e2) if (callr_data$has_otel) { cut <- base::which(e2$trace$scope == "global")[1] callr_data$otel_span$record_exception(e2) if (!base::is.na(cut)) { } e2$trace <- e2$trace[-(1:cut), ] base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", } ".error")) if (callr_data$has_otel) { } callr_data$otel_span$record_exception(e2)}, interrupt = function(e) { } { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", callr_data <- base::as.environment("tools:callr")$`__callr_data__` ".error")) err <- callr_data$err } if (FALSE) {}, callr_message = function(e) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) base::try({ utils::dump.frames("__callr_dump__") callr_data <- base::as.environment("tools:callr")$`__callr_data__` base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, pxlib <- callr_data$pxlib envir = callr_data) if (base::is.null(e$code)) { base::rm("__callr_dump__", envir = .GlobalEnv) e$code <- "301" } } e <- err$process_call(e) msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, e2 <- err$new_error("error in callr subprocess") NULL))) class <- base::class data <- base::paste0(e$code, " ", base::nchar(msg), "\n", class(e2) <- base::c("callr_remote_error", class(e2)) msg) e2 <- err$add_trace_back(e2) if (callr_data$has_otel) { cut <- base::which(e2$trace$scope == "global")[1] callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) if (!base::is.na(cut)) { } e2$trace <- e2$trace[-(1:cut), ] pxlib$write_fd(3L, data) } if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { if (callr_data$has_otel) { base::invokeRestart("cli_message_handled") callr_data$otel_span$record_exception(e2) } } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", ".error")) }}, callr_message = function(e) { base::try({ base::invokeRestart("muffleMessage") callr_data <- base::as.environment("tools:callr")$`__callr_data__` } pxlib <- callr_data$pxlib }) if (base::is.null(e$code)) {}) e$code <- "301"
> test_loo_and_waic.R: }59: msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, doTryCatch(return(expr), name, parentenv, handler) NULL)))
> test_loo_and_waic.R: data <- base::paste0(e$code, " ", base::nchar(msg), "\n", 60: msg)tryCatchOne(expr, names, parentenv, handlers[[1L]]) if (callr_data$has_otel) {
> test_loo_and_waic.R: callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code))61: }tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) pxlib$write_fd(3L, data)
> test_loo_and_waic.R: if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) {62: base::invokeRestart("cli_message_handled")doTryCatch(return(expr), name, parentenv, handler) }
> test_loo_and_waic.R: else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) {63: base::invokeRestart("muffleMessage")tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), } names[nh], parentenv, handlers[[nh]]) })
> test_loo_and_waic.R: })64:
> test_loo_and_waic.R: tryCatchList(expr, classes, parentenv, handlers)59:
> test_loo_and_waic.R: doTryCatch(return(expr), name, parentenv, handler)65:
> test_loo_and_waic.R: base::tryCatch(base::withCallingHandlers({60: {tryCatchOne(expr, names, parentenv, handlers[[1L]]) NULL
> test_loo_and_waic.R: NULL61: }tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155605190f1ce"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", compress = FALSE) base::flush(base::stdout())
> test_loo_and_waic.R: base::flush(base::stderr())62: {doTryCatch(return(expr), name, parentenv, handler) NULL
> test_loo_and_waic.R: NULL63: }tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), base::invisible() names[nh], parentenv, handlers[[nh]])}, error = function(e) {
> test_loo_and_waic.R: {64: callr_data <- base::as.environment("tools:callr")$`__callr_data__`tryCatchList(expr, classes, parentenv, handlers) err <- callr_data$err
> test_loo_and_waic.R: if (FALSE) {65: base::assign(".Traceback", base::.traceback(4), envir = callr_data)base::tryCatch(base::withCallingHandlers({ { NULL NULL }
> test_loo_and_waic.R: utils::dump.frames("__callr_dump__") base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155605190f1ce"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) { cut <- base::which(e2$trace$scope == "global")[1] NULL if (!base::is.na(cut)) { NULL e2$trace <- e2$trace[-(1:cut), ] } } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) e2$trace <- e2$trace[-(1:cut), ] } } e <- err$process_call(e) if (callr_data$has_otel) { e2 <- err$new_error("error in callr subprocess") callr_data$otel_span$record_exception(e2) class <- base::class } class(e2) <- base::c("callr_remote_error", class(e2)) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", e2 <- err$add_trace_back(e2) ".error")) cut <- base::which(e2$trace$scope == "global")[1] } if (!base::is.na(cut)) {}, callr_message = function(e) { e2$trace <- e2$trace[-(1:cut), ] base::try({ } callr_data <- base::as.environment("tools:callr")$`__callr_data__` if (callr_data$has_otel) { pxlib <- callr_data$pxlib callr_data$otel_span$record_exception(e2) if (base::is.null(e$code)) { } e$code <- "301" base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", ".error")) }}, interrupt = function(e) { { } callr_data <- base::as.environment("tools:callr")$`__callr_data__` msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, err <- callr_data$err NULL))) if (FALSE) { data <- base::paste0(e$code, " ", base::nchar(msg), "\n", base::assign(".Traceback", base::.traceback(4), envir = callr_data) msg) utils::dump.frames("__callr_dump__") if (callr_data$has_otel) { base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") envir = callr_data) } base::rm("__callr_dump__", envir = .GlobalEnv) else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { } base::invokeRestart("muffleMessage") e <- err$process_call(e) } e2 <- err$new_error("error in callr subprocess") }) class <- base::class}), error = function(e) { class(e2) <- base::c("callr_remote_error", class(e2)) { e2 <- err$add_trace_back(e2) NULL cut <- base::which(e2$trace$scope == "global")[1] NULL if (!base::is.na(cut)) { } e2$trace <- e2$trace[-(1:cut), ] if (FALSE) { } base::try(base::stop(e)) if (callr_data$has_otel) { } callr_data$otel_span$record_exception(e2) if (FALSE) { } base::q(save = "no", status = 1) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-155602f33538", } ".error")) base::invisible() }}, interrupt = function(e) {}, callr_message = function(e) { { base::try({ NULL callr_data <- base::as.environment("tools:callr")$`__callr_data__` NULL pxlib <- callr_data$pxlib } if (base::is.null(e$code)) { if (FALSE) { e$code <- "301" base::q(save = "no", status = 1) } } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, base::invisible() NULL)))}) data <- base::paste0(e$code, " ", base::nchar(msg), "\n",
> test_loo_and_waic.R: msg)An irrecoverable exception occurred. R is aborting now ...
> test_loo_and_waic.R: if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_and_waic.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_and_waic-30.R
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 1: outer(X, Y)
> test_loo_predictive_metric.R: 2: -theta %o% x
> test_loo_predictive_metric.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R: 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_predictive_metric.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_predictive_metric.R: 14: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_predictive_metric.R: 18: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, method = "psis")
> test_loo_predictive_metric.R: 19: psis.matrix(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 20: psis(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 21: eval(code, test_env)
> test_loo_predictive_metric.R: 22: eval(code, test_env)
> test_loo_predictive_metric.R: 23: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 25: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 26: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 27: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_predictive_metric.R: 28: doWithOneRestart(return(expr), restart)
> test_loo_predictive_metric.R: 29: withOneRestart(expr, restarts[[1L]])
> test_loo_predictive_metric.R: 30: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_predictive_metric.R: 31: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_predictive_metric.R: 32: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_predictive_metric.R: 33: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_predictive_metric.R: 34: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 35: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 36: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 37: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_predictive_metric.R: 38:
> test_loo_predictive_metric.R: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_predictive_metric.R: 39: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_predictive_metric.R: 40: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE))
> test_loo_predictive_metric.R: 41: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_predictive_metric.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_predictive_metric.R: 42: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155606bd6680a"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_predictive_metric.R: 43: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155606bd6680a"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", compress = FALSE)
> test_loo_predictive_metric.R: 44: base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155606bd6680a"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_predictive_metric.R: 45: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 46: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 47: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_predictive_metric.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 49: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 1: outer(X, Y)
> test_loo_predictive_metric.R: 2:
> test_loo_predictive_metric.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 51: base::tryCatch(base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155606bd6680a"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", -theta %o% x
> test_loo_predictive_metric.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R: compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL 4: }psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R: base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: e2 <- err$add_trace_back(e2)11: cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) {tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", ".error")) }}, interrupt = function(e) { LONG <- 75L { sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, if (w > LONG) envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv)
> test_loo_predictive_metric.R: } prefix <- paste0(prefix, "\n ") e <- err$process_call(e) } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") e2 <- err$new_error("error in callr subprocess") .Internal(seterrmessage(msg[1L])) class <- base::class if (!silent && isTRUE(getOption("show.error.messages"))) { class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))}) } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) }
> test_loo_predictive_metric.R: base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", ".error")) }12: }, callr_message = function(e) {try(lapply(X = S, FUN = FUN, ...), silent = TRUE) base::try({
> test_loo_predictive_metric.R: callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) {13: e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_predictive_metric.R: 14: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 15: NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code))lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_predictive_metric.R: else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) {18: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, method = "psis")
> test_loo_predictive_metric.R: base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL19: NULL } if (FALSE) { base::try(base::stop(e))psis.matrix(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 20: psis(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 21: } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) {eval(code, test_env) { NULL NULL }
> test_loo_predictive_metric.R: 22: eval(code, test_env)
> test_loo_predictive_metric.R: 23: withCallingHandlers({ if (FALSE) { eval(code, test_env) base::q(save = "no", status = 1) new_expectations <- the$test_expectations > starting_expectations } base::invisible()})
> test_loo_predictive_metric.R: if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()An irrecoverable exception occurred. R is aborting now ...
> test_loo_predictive_metric.R: }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 25: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 26: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 27: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_predictive_metric.R: 28: doWithOneRestart(return(expr), restart)
> test_loo_predictive_metric.R: 29: withOneRestart(expr, restarts[[1L]])
> test_loo_predictive_metric.R: 30: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_predictive_metric.R: 31: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_predictive_metric.R: 32: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_predictive_metric.R: 33: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_predictive_metric.R: 34: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 35: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 36: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 37: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_predictive_metric.R: 38: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_predictive_metric.R: 39: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_predictive_metric.R: 40: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE))
> test_loo_predictive_metric.R: 41: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_predictive_metric.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_predictive_metric.R: 42: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155606bd6680a"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_predictive_metric.R: 43: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155606bd6680a"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", compress = FALSE)
> test_loo_predictive_metric.R: 44: base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155606bd6680a"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2))
> test_loo_predictive_metric.R: e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_predictive_metric.R: 45: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 46: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 47: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_predictive_metric.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 49: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_predictive_metric.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 51: base::tryCatch(base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-fun-155606bd6680a"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpvu5JuA/callr-rs-result-1556049489fd5", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_predictive_metric.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_predictive_metric-4.R
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
══ Skipped tests (34) ══════════════════════════════════════════════════════════
• On CRAN (32): 'test_loo_subsampling_cases.R:4:3',
'test_loo_subsampling_cases.R:256:3', 'test_E_loo.R:134:1',
'test_E_loo.R:142:1', 'test_compare.R:91:1', 'test_compare.R:122:1',
'test_compare.R:160:1', 'test_crps.R:27:1',
'test_deprecated_extractors.R:8:1', 'test_deprecated_extractors.R:106:1',
'test_gpdfit.R:1:1', 'test_kfold_helpers.R:139:1',
'test_loo_and_waic.R:23:1', 'test_loo_moment_matching.R:157:1',
'test_loo_moment_matching.R:247:1', 'test_loo_moment_matching.R:365:1',
'test_model_weighting.R:69:1', 'test_print_plot.R:41:1',
'test_print_plot.R:45:1', 'test_print_plot.R:151:1',
'test_print_plot.R:169:1', 'test_print_plot.R:175:1',
'test_print_plot.R:181:1', 'test_psis.R:13:1', 'test_psis.R:39:1',
'test_psislw.R:15:1', 'test_relative_eff.R:7:1', 'test_relative_eff.R:43:3',
'test_loo_subsampling.R:896:3', 'test_loo_subsampling.R:1077:3',
'test_tisis.R:76:1', 'test_tisis.R:213:1'
• Sys.info()[["sysname"]] == "Darwin" && R.version$arch == "aarch64" is TRUE
(2): 'test_loo_moment_matching.R:468:3', 'test_psis.R:157:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_loo_and_waic.R:30:3'): loo with cores=1 and cores=2 gives same results ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─base::suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) at test_loo_and_waic.R:30:3
2. │ └─base::withCallingHandlers(...)
3. ├─loo::loo(LLarr, r_eff = r_eff_arr, cores = 2)
4. └─loo::loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
5. └─loo:::importance_sampling.array(...)
6. └─loo:::do_importance_sampling(...)
7. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
8. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
── Error ('test_loo_predictive_metric.R:4:1'): (code run outside of `test_that()`) ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─loo::psis(-LL, r_eff = r_eff, cores = 2) at test_loo_predictive_metric.R:4:1
2. └─loo:::psis.matrix(-LL, r_eff = r_eff, cores = 2)
3. └─loo:::importance_sampling.matrix(...)
4. └─loo:::do_importance_sampling(...)
5. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
6. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64