Last updated on 2025-09-01 09:48:56 CEST.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.34 | 254.56 | 267.90 | OK | |
r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.99 | 243.10 | 253.09 | OK | |
r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 476.97 | OK | |||
r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
r-patched-linux-x86_64 | 1.1.4 | 13.57 | 261.65 | 275.22 | OK | |
r-release-linux-x86_64 | 1.1.4 | 15.01 | 254.59 | 269.60 | OK | |
r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
r-release-macos-x86_64 | 1.1.4 | 226.00 | ERROR | |||
r-release-windows-x86_64 | 1.1.4 | 21.00 | 201.00 | 222.00 | OK | |
r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
r-oldrel-macos-x86_64 | 1.1.4 | 205.00 | ERROR | |||
r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 235.00 | 261.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/149s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.443, system: 0.038, elapsed: 1.912 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.050, system: 0.061, elapsed: 21.180 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.521 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.799, system: 0.187, elapsed: 10.297 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.371 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.204, system: 0.321, elapsed: 35.403 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.447, system: 0.032, elapsed: 2.643 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.184, system: 0.086, elapsed: 18.387 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.398 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.744, system: 0.164, elapsed: 7.339 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.236 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.257, system: 0.317, elapsed: 30.157 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.554, system: 0.034, elapsed: 2.491 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.175, system: 0.141, elapsed: 15.994 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.011, elapsed: 0.265 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.811, system: 0.194, elapsed: 7.014 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.226 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.164, system: 0.215, elapsed: 1.099 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.675, system: 0.621, elapsed: 28.042 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.467, system: 0.032, elapsed: 2.080 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.135, system: 0.120, elapsed: 13.282 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.017, elapsed: 0.280 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.784, system: 0.204, elapsed: 5.740 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.286 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.315, system: 0.485, elapsed: 22.897 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.698, system: 0.898, elapsed: 45.577 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/132s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.477, system: 0.041, elapsed: 1.632 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.177, system: 0.094, elapsed: 15.096 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.301 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.608, system: 0.187, elapsed: 6.531 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.003, elapsed: 0.306 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.125, system: 0.357, elapsed: 24.596 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.478, system: 0.032, elapsed: 2.437 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.199, system: 0.076, elapsed: 15.372 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.349 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.655, system: 0.161, elapsed: 6.846 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.279 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.213, system: 0.309, elapsed: 26.183 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.514, system: 0.035, elapsed: 2.501 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.128, system: 0.079, elapsed: 13.799 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.010, elapsed: 0.290 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.596, system: 0.174, elapsed: 7.058 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.013, elapsed: 0.323 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.074, system: 0.240, elapsed: 1.114 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.294, system: 0.580, elapsed: 26.096 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.533, system: 0.033, elapsed: 2.365 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.207, system: 0.091, elapsed: 13.582 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.321 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.589, system: 0.165, elapsed: 6.159 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.005, elapsed: 0.300 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.125, system: 0.455, elapsed: 22.900 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.458, system: 0.790, elapsed: 46.732 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64