CRAN Package Check Results for Package rbmi

Last updated on 2025-01-12 09:54:26 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3.1 8.59 326.50 335.09 OK
r-devel-linux-x86_64-debian-gcc 1.3.1 6.75 252.37 259.12 OK
r-devel-linux-x86_64-fedora-clang 1.3.1 338.82 ERROR
r-devel-linux-x86_64-fedora-gcc 1.3.1 659.91 OK
r-devel-windows-x86_64 1.3.1 12.00 337.00 349.00 OK
r-patched-linux-x86_64 1.3.1 11.98 352.96 364.94 OK
r-release-linux-x86_64 1.3.1 8.80 349.56 358.36 OK
r-release-macos-arm64 1.3.1 154.00 OK
r-release-macos-x86_64 1.3.1 287.00 OK
r-release-windows-x86_64 1.3.1 11.00 241.00 252.00 OK
r-oldrel-macos-arm64 1.3.1 139.00 OK
r-oldrel-macos-x86_64 1.3.1 289.00 OK
r-oldrel-windows-x86_64 1.3.1 14.00 304.00 318.00 OK

Additional issues

donttest

Check Details

Version: 1.3.1
Check: tests
Result: ERROR Running ‘testthat.R’ [209s/338s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(rbmi) > > test_check("rbmi") mmrm() registered as emmeans extension [ FAIL 4 | WARN 0 | SKIP 13 | PASS 1246 ] ══ Skipped tests (13) ══════════════════════════════════════════════════════════ • On CRAN (1): 'test-mmrm.R:337:5' • is_full_test() is not TRUE (12): 'test-draws.R:115:5', 'test-fullusage.R:43:5', 'test-fullusage.R:117:5', 'test-fullusage.R:209:5', 'test-fullusage.R:300:5', 'test-fullusage.R:431:5', 'test-fullusage.R:520:5', 'test-fullusage.R:673:5', 'test-mcmc.R:327:5', 'test-mcmc.R:502:5', 'test-parallel.R:8:5', 'test-reproducibility.R:9:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-draws.R:144:9'): bayes ───────────────────────────────────────── Error in `fit_mcmc(designmat = model_df_scaled[, -1, drop = FALSE], outcome = model_df_scaled[, 1, drop = TRUE], group = data2[[vars$group]], visit = data2[[vars$visit]], subjid = data2[[vars$subjid]], method = method, quiet = quiet)`: cannot allocate vector of size 1044994.8 Gb Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-draws.R:143:5 2. │ └─base::withCallingHandlers(...) 3. ├─rbmi::draws(d$dat, d$dat_ice, d$vars, meth, quiet = TRUE) at test-draws.R:144:9 4. └─rbmi:::draws.bayes(d$dat, d$dat_ice, d$vars, meth, quiet = TRUE) 5. └─rbmi:::fit_mcmc(...) ── Error ('test-mcmc.R:108:13'): Verbose suppression works ───────────────────── Error in `fit_mcmc(designmat = model_df_scaled[, -1, drop = FALSE], outcome = model_df_scaled[, 1, drop = TRUE], group = data2[[vars$group]], visit = data2[[vars$visit]], subjid = data2[[vars$subjid]], method = method, quiet = quiet)`: cannot allocate vector of size 1044995.9 Gb Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-mcmc.R:106:5 2. │ └─base::withCallingHandlers(...) 3. ├─utils::capture.output(...) at test-mcmc.R:107:9 4. │ └─base::withVisible(...elt(i)) 5. ├─rbmi::draws(...) at test-mcmc.R:108:13 6. └─rbmi:::draws.bayes(...) 7. └─rbmi:::fit_mcmc(...) ── Error ('test-print.R:102:9'): print - bayesian ────────────────────────────── Error in `fit_mcmc(designmat = model_df_scaled[, -1, drop = FALSE], outcome = model_df_scaled[, 1, drop = TRUE], group = data2[[vars$group]], visit = data2[[vars$visit]], subjid = data2[[vars$subjid]], method = method, quiet = quiet)`: cannot allocate vector of size 1044995.9 Gb Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-print.R:101:5 2. │ └─base::withCallingHandlers(...) 3. ├─rbmi::draws(...) at test-print.R:102:9 4. └─rbmi:::draws.bayes(...) 5. └─rbmi:::fit_mcmc(...) ── Error ('test-reproducibility.R:121:9'): bayes - set.seed produces identical results ── Error in `fit_mcmc(designmat = model_df_scaled[, -1, drop = FALSE], outcome = model_df_scaled[, 1, drop = TRUE], group = data2[[vars$group]], visit = data2[[vars$visit]], subjid = data2[[vars$subjid]], method = method, quiet = quiet)`: cannot allocate vector of size 1044995.8 Gb Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-reproducibility.R:120:5 2. │ └─base::withCallingHandlers(...) 3. ├─rbmi::draws(dat, dat_ice, vars, meth, quiet = TRUE) at test-reproducibility.R:121:9 4. └─rbmi:::draws.bayes(dat, dat_ice, vars, meth, quiet = TRUE) 5. └─rbmi:::fit_mcmc(...) [ FAIL 4 | WARN 0 | SKIP 13 | PASS 1246 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang