FieldSimR: Simulation of Plot Errors and Phenotypes in Plant Breeding Field Trials

Simulates plot data in multi-environment field trials with one or more traits. Its core function generates plot errors that capture spatial trend, random error (noise), and extraneous variation, which are combined at a user-defined ratio. Phenotypes can be generated by combining the plot errors with simulated genetic values that capture genotype-by-environment (GxE) interaction using wrapper functions for the R package 'AlphaSimR'.

Version: 1.3.0
Depends: R (≥ 3.5.0)
Imports: ggplot2, interp, lattice, mbend, cluster
Suggests: AlphaSimR, knitr, rmarkdown
Published: 2024-04-03
Author: Christian Werner ORCID iD [aut, cre], Daniel Tolhurst ORCID iD [aut]
Maintainer: Christian Werner <werner.christian at proton.me>
BugReports: https://github.com/crWerner/fieldsimr/issues
License: GPL (≥ 3)
URL: https://github.com/crWerner/fieldsimr, https://crwerner.github.io/fieldsimr/
NeedsCompilation: no
Language: en-GB
Materials: README NEWS
CRAN checks: FieldSimR results

Documentation:

Reference manual: FieldSimR.pdf
Vignettes: Simulation of genetic values based on a compound symmetry model for genotype-by-environment (GxE) interaction
Simulation of plot errors and phenotypes in a plant breeding field trial
Simulation of genetic values based on an unstructured model for genotype-by-environment (GxE) interaction

Downloads:

Package source: FieldSimR_1.3.0.tar.gz
Windows binaries: r-prerel: FieldSimR_1.3.0.zip, r-release: FieldSimR_1.3.0.zip, r-oldrel: FieldSimR_1.3.0.zip
macOS binaries: r-prerel (arm64): FieldSimR_1.3.0.tgz, r-release (arm64): FieldSimR_1.3.0.tgz, r-oldrel (arm64): FieldSimR_1.3.0.tgz, r-prerel (x86_64): FieldSimR_1.3.0.tgz, r-release (x86_64): FieldSimR_1.3.0.tgz
Old sources: FieldSimR archive

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