MIDASim: Simulating Realistic Microbiome Data using 'MIDASim'
The 'MIDASim' package is a microbiome data simulator for generating realistic microbiome datasets by adapting a user-provided template. It supports the controlled introduction of experimental signals-such as shifts in taxon relative abundances, prevalence, and sample library sizes-to create distinct synthetic populations under diverse simulation scenarios. For more details, see He et al. (2024) <doi:10.1186/s40168-024-01822-z>.
| Version: |
2.0 |
| Depends: |
R (≥ 3.5.0) |
| Imports: |
psych, MASS, pracma, scam, stats |
| Suggests: |
vegan, phyloseq, rmarkdown, knitr, roxygen2, testthat |
| Published: |
2025-07-05 |
| DOI: |
10.32614/CRAN.package.MIDASim |
| Author: |
Mengyu He [aut, cre] |
| Maintainer: |
Mengyu He <mhe44 at emory.edu> |
| BugReports: |
https://github.com/mengyu-he/MIDASim/issues |
| License: |
GPL-2 |
| URL: |
https://github.com/mengyu-he/MIDASim |
| NeedsCompilation: |
no |
| CRAN checks: |
MIDASim results |
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