Last updated on 2026-05-02 09:50:49 CEST.
| Package | ERROR | OK |
|---|---|---|
| mapi | 3 | 10 |
Current CRAN status: ERROR: 3, OK: 10
Version: 1.1.4
Check: tests
Result: ERROR
Running 'testthat.R' [74s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Attaching package: 'data.table'
The following object is masked from 'package:base':
%notin%
Linking to GEOS 3.14.1, GDAL 3.12.1, PROJ 9.7.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.950, system: 0.040, elapsed: 2.000 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 11.910, system: 0.040, elapsed: 11.950 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.250, system: 0.000, elapsed: 0.250 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.280, system: 1.060, elapsed: 7.310 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.000, elapsed: 0.180 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.440, system: 1.170, elapsed: 22.600 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.970, system: 0.110, elapsed: 2.060 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 11.820, system: 0.000, elapsed: 11.850 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.280, system: 0.000, elapsed: 0.280 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.470, system: 0.800, elapsed: 7.180 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.000, elapsed: 0.170 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.480, system: 0.930, elapsed: 22.320 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.000, system: 0.060, elapsed: 2.060 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 11.740, system: 0.030, elapsed: 11.770 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.020, elapsed: 0.250 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.590, system: 1.170, elapsed: 7.670 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.000, elapsed: 0.180 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
... computing probabilities from permuted values ...
... done. [user: 0.480, system: 0.090, elapsed: 1.800 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.250, system: 1.410, elapsed: 24.800 seconds]
Building local cartesian grid...
Flavor: r-devel-windows-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/555s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Attaching package: 'data.table'
The following object is masked from 'package:base':
%notin%
Linking to GEOS 3.14.1, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.559, system: 0.041, elapsed: 2.520 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.514, system: 0.068, elapsed: 14.613 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.018, elapsed: 1.014 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.307, system: 0.828, elapsed: 107.650 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.007, elapsed: 0.191 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.461, system: 0.997, elapsed: 126.918 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.725, system: 0.049, elapsed: 2.162 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.371, system: 0.062, elapsed: 12.732 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.014, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.311, system: 0.763, elapsed: 63.367 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.005, elapsed: 0.188 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.650, system: 0.962, elapsed: 79.409 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.623, system: 0.044, elapsed: 2.810 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.548, system: 0.059, elapsed: 16.367 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.228, system: 0.014, elapsed: 1.077 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.194, system: 0.819, elapsed: 125.239 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.252 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.269, system: 0.245, elapsed: 1.275 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.721, system: 1.218, elapsed: 148.009 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.514, system: 0.031, elapsed: 2.598 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.613, system: 0.058, elapsed: 14.394 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.229, system: 0.017, elapsed: 1.000 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.188, system: 0.867, elapsed: 131.475 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.002, elapsed: 0.187 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.751, system: 0.641, elapsed: 40.138 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.160, system: 1.642, elapsed: 190.856 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [108s/574s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.755, system: 0.097, elapsed: 4.952 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.754, system: 0.082, elapsed: 24.501 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.021, elapsed: 1.211 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.238, system: 0.940, elapsed: 181.829 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.006, elapsed: 0.505 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.762, system: 1.182, elapsed: 214.557 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.605, system: 0.033, elapsed: 4.676 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.678, system: 0.086, elapsed: 24.615 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.226, system: 0.018, elapsed: 1.167 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.216, system: 0.891, elapsed: 178.375 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.592 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.474, system: 1.054, elapsed: 210.998 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.597, system: 0.042, elapsed: 5.736 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.723, system: 0.108, elapsed: 26.986 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.015, elapsed: 0.972 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.022, system: 0.781, elapsed: 61.881 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.007, elapsed: 0.248 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.392, system: 0.323, elapsed: 1.382 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.839, system: 1.304, elapsed: 98.883 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.692, system: 0.050, elapsed: 2.315 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.670, system: 0.072, elapsed: 11.134 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.335, system: 0.030, elapsed: 0.234 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.501, system: 1.026, elapsed: 6.963 seconds]
Computing values for grid cells...
... done. [user: 0.203, system: 0.006, elapsed: 0.211 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 14.436, system: 0.975, elapsed: 14.535 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 36.710, system: 2.206, elapsed: 36.255 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64